FC931333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_THEVO (50S ribosomal protein L2P OS=Thermoplasma volcanium GN=rpl2p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 79/211 (37.44%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ I QR+G GS V++S +H + L GE V+ +IIH PGR +PL + +K +A G Y GQ + G T+ G L +IP+G+ V N+E GD G F R +G +A+V+SH +KLPSG+ + CRA +G VA G + P+LKAG H R K VRGVAMN V HP Sbjct: 1 MGKHIIPQRRGHGSLVYRSPSHRHV--VDVKHLKPGEY------VVKDIIHAPGRNSPLLELVDS-----TGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHP 195
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.206e-25 Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ I QR+G GS V++S +H + +D G VI +IIH PGR APL + +K +A G + GQ + G ++ G L +IP+G+ V N+E GD G F R +G +A+V+SH +KLPSG + CRA +G VA G + P+LKAG H R K VRGVAMN V HP Sbjct: 1 MGKHIIPQRRGHGSLVYRSPSHRHI--TEVKHVDQGTY------VIKDIIHAPGRNAPLLEL-----MGSDGKKAYQIAFTGAFVGQNIVAGNVDSVSPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHGQH---VTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHP 195
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_BORRA (50S ribosomal protein L2 OS=Borrelia recurrentis (strain A1) GN=rplB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24 Identity = 72/217 (33.18%), Postives = 116/217 (53.46%), Query Frame = 1 Query: 55 ESTQMGRVIRAQRKGAG--SVFKSHTHHRKGPARFRSLDFGERNGY-LKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 +S G+V RA R +G SV + H++ R+R +DF R+ + + + I +DP R +A + +R K +A +G+ G + G A + +GN LPL +IP G +V N+E ++G G R +G YA++I+ D D +KLPSG +++ C A +G+V + KAG + ++ +R PKVRGVAMNP++HP Sbjct: 32 KSLTKGKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYR-----DGDKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKS--RWLGRR---PKVRGVAMNPIDHP 233
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_BORDL (50S ribosomal protein L2 OS=Borrelia duttonii (strain Ly) GN=rplB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24 Identity = 72/217 (33.18%), Postives = 116/217 (53.46%), Query Frame = 1 Query: 55 ESTQMGRVIRAQRKGAG--SVFKSHTHHRKGPARFRSLDFGERNGY-LKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 +S G+V RA R +G SV + H++ R+R +DF R+ + + + I +DP R +A + +R K +A +G+ G + G A + +GN LPL +IP G +V N+E ++G G R +G YA++I+ D D +KLPSG +++ C A +G+V + KAG + ++ +R PKVRGVAMNP++HP Sbjct: 32 KSLTKGKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYR-----DGDKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKS--RWLGRR---PKVRGVAMNPIDHP 233
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_MYCAP (50S ribosomal protein L2 OS=Mycoplasma agalactiae (strain PG2) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22 Identity = 67/209 (32.06%), Postives = 99/209 (47.37%), Query Frame = 1 Query: 76 VIRAQRKGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 VI + G + K H+ G + +R +DF + + I +DP R A + + + +K +A EG+ GQ V G ++VGN LPL +IPEG V NVE G G+ AR +G A ++ + D ++L SG + + + CRA IG V G + L KAG + H P VRG MNP++HP Sbjct: 36 VILKKNSGRNNQGKITVRHQGGRVKRYYRIIDFKRNKDDIPATVKSIEYDPNRSANICLLAYA-----DGEKRYILAPEGIKVGQKVVSGNNVDILVGNSLPLSNIPEGTFVHNVEMQPGGGGIIARSAGTSAQILGKDDDGKYVVLRLKSGEMRRILARCRATIGTVGNGEHSLVLLGKAGRSRH-----LGVRPTVRGSVMNPIDHP 234
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_DESAP (50S ribosomal protein L2 OS=Desulforudis audaxviator (strain MP104C) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22 Identity = 71/211 (33.65%), Postives = 103/211 (48.82%), Query Frame = 1 Query: 76 VIRAQRKGAGSVFKSHT--HHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 ++ RK AG F+ HR G + +R +DF + G + I +DP R A +A V + +K VA G+ GQ + G +A + VGN LPLR+IP G ++ N+E + G R +G A +++ + D ++LPSG ++ P CRA IGQV + KAG A P VRGV MNPV+HP Sbjct: 33 LVEPLRKKAGRNFQGRVTVRHRGGGHKRLYRVIDFKRNKDGVPGKVATIEYDPNRSANIALVNYA-----DGEKRYIVAPAGLKVGQEIMSGPQADIKVGNALPLRNIPPGVLIHNIELYPGHGARVVRSAGGSAQLMA--KEGDYAHVRLPSGEVRLFPLDCRATIGQVGNVEHENIVIGKAGRARW-----LGIRPTVRGVVMNPVDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22 Identity = 75/242 (30.99%), Postives = 110/242 (45.45%), Query Frame = 1 Query: 13 HLSKTPKP*T-----ESHSESTQMGRVIRAQR---KGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 696 HL KT P T +S +S +I Q KG S HR G + +R +DF Y+ G I I +DP R A + + + +K + G G + G + + +GN LPL +P G + N+E +G G AR +G A +I+ + + +KLPSG +++ C A +GQV G +K L +AG+ CW P VRGV MNPV+HP Sbjct: 4 HLYKTSTPSTRNGAVDSQVKSNTRNNLIYGQHRCGKGRNSRGIITARHRGGGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHP 229
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_AMOA5 (50S ribosomal protein L2 OS=Amoebophilus asiaticus (strain 5a2) GN=rplB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 69/194 (35.57%), Postives = 96/194 (49.48%), Query Frame = 1 Query: 130 HRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPM 699 H+K R R +DF R + V+ I +DP R A +A + + K +A EG+ G V G VGN +PLR++P G +V N+E H G AR +G YA +++ + +KLPSG ++V C A +G V+ L KAG RN W P+VRGVAMNPV+HPM Sbjct: 58 HKK---RMRIIDFKRRKYDIPAVVNSIQYDPMRTAYIALLYY-----VDGAKSYIIAPEGLKVGDRVLSGNNIAPEVGNAMPLRTMPTGTIVHNIELHPGRGAAMARSAGTYAQLLA--KEERYVTLKLPSGEMRMVLGECMATVGTVSNSEHNNIVLGKAG---------RNRWLGRRPRVRGVAMNPVDHPM 232
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.200e-21 Identity = 74/242 (30.58%), Postives = 110/242 (45.45%), Query Frame = 1 Query: 13 HLSKTPKP*T-----ESHSESTQMGRVIRAQR---KGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 696 HL KT P T +S +S +I Q KG + HR G + +R +DF Y+ G I I +DP R A + + + +K + G G + G + + +GN LPL +P G + N+E +G G AR +G A +I+ + + +KLPSG +++ C A +GQV G +K L +AG+ CW P VRGV MNPV+HP Sbjct: 4 HLYKTSTPSTRNGAVDSQVKSNTRNNLIYGQHRCSKGRNARGIITARHRGGGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHP 229
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_TREDE (50S ribosomal protein L2 OS=Treponema denticola GN=rplB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 77/222 (34.68%), Postives = 112/222 (50.45%), Query Frame = 1 Query: 55 ESTQMGRVIRAQRKGAG--SVFKSHTHHRKGPARFRSLDFGERNGY-LKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPM 699 +S G+ RA R G SV H++ ++R +DF +RN Y + G + I +DP R A +A + F +K +A +G+ GQ + G ATL V N LPL +IP G V N+E +G G AR +G A+V + + + I+LPSG ++V C A IG+V L KAG R+ W P VRG+AMNP++HP+ Sbjct: 31 KSLTTGKKNRAGRDSRGRISVRGQGGGHKQ---KYRQIDF-KRNKYGIPGTVRTIEYDPNRSANIALI-----FYADGEKRYIIAPKGLKIGQKIMSGEMATLDVANALPLEAIPVGFTVHNIELTIGRGGQMARSAGAGALVAA--KEGEYVTIRLPSGETRLVNKKCYATIGEVGNEDHMNTSLGKAG---------RSRWLGIRPTVRGMAMNPIDHPL 232 The following BLAST results are available for this feature:
BLAST of FC931333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931333 ID=FC931333; Name=FC931333; organism=Citrus clementina; type=EST; length=751bpback to top |