FC931340

Overview
NameFC931340
Unique NameFC931340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.590e-79
Identity = 137/235 (58.30%), Postives = 180/235 (76.60%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + KFY+ FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMK+ Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS TKEGL+L E E EKK +E  K KFE LCK++K +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKDLV+LLFE
Sbjct:  419 YKKFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLADYVSRMKDNQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFE 653          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.327e-78
Identity = 136/235 (57.87%), Postives = 183/235 (77.87%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + KFYE F KN+KLGIHEDS N+ KL ELLR+HS++SG+++T+LKDYVTRMKEGQ  IYY+TG+SKK +E SPF+E+ +++G+EVL+M + IDEY + Q+K+FE KK    TKEG+  +E+E+EKK +E  K  +E LCK +KDVLG               PC LVT E+GW+A+ME+IM+ QALRD+SM+ YM SKKTMEINP +PI++EL++R +AD+NDK+VKDLV LLF+
Sbjct:  409 YKKFYEQFGKNVKLGIHEDSANRKKLMELLRFHSSESGEDMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGFEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKTAYERLCKAMKDVLGDKVEKVVVSERLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMSKKTMEINPAHPIVKELKRRVEADENDKAVKDLVYLLFD 643          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.039e-78
Identity = 136/235 (57.87%), Postives = 179/235 (76.17%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + KFY+ FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMKE Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS TKEGL+L E + EKK +E  K KFE LCK++  +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKDLV+LLFE
Sbjct:  418 YKKFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKAKFESLCKLMNAILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFE 652          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.573e-77
Identity = 143/237 (60.34%), Postives = 189/237 (79.75%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLLLFE 713
            +F+KFY +FSKN+KLGIHEDS N+  LA+LLR++STKSGDE TSL DYVTRM E Q ++YYITGES KAV  SPFL+ LK+KG+EVL++VD IDEYA+ QLKEFEGKKLV  TK+  +L+E+E+EKK +E  +++++GL K +K+VLG               PC + TG++GW+ANMERIMKAQALRD SM+ YMSSKKT EI+P++PI++EL+++ +AD +NDK+VK +V LLFE
Sbjct:  405 QFDKFYTAFSKNIKLGIHEDSQNRNTLAKLLRFNSTKSGDEQTSLSDYVTRMPEHQKNMYYITGESIKAVSKSPFLDSLKEKGFEVLFLVDPIDEYAMTQLKEFEGKKLVDITKD-FELEETEEEKKQREAEEKEYDGLAKALKNVLGDKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKELKQKVEADGENDKTVKSIVQLLFE 640          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.668e-76
Identity = 134/235 (57.02%), Postives = 180/235 (76.60%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + KFYE FSKN+KLGIHEDSTN+ KL ELLR+HS++SG+E+T+LKDYVTRMKEGQ  IYY+TG+SKK +E SPF+E+ +++G EVL+M D IDEY + Q+K+FE KK    TKEG+  +E+E+EKK +E  K  +E LCK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD+SM+ YM  KKTMEIN  + I++EL++R +AD+NDK+ KDL+ LLF+
Sbjct:  409 YKKFYEQFSKNVKLGIHEDSTNRKKLMELLRFHSSESGEEMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFLLFD 643          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.081e-75
Identity = 133/235 (56.60%), Postives = 180/235 (76.60%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + +FYE F KN+KLGIH+D+ N+ KL E +R++S++SG+E+T+LKDYVTRMK GQ  IYYITG+SKK +E+SPF+E+ K++G EVL+M + IDEY + Q+K+FE KK    TKEG+  +ESE+EK+ +E  K   E LCK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD+SMA YM SKKTME+NP +PI++ELR+R DAD+NDK+VKDLV LLF+
Sbjct:  405 YKQFYEQFGKNIKLGIHQDTANRKKLMEFVRFYSSESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLESSPFIEQAKRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFD 639          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.412e-75
Identity = 133/235 (56.60%), Postives = 181/235 (77.02%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + +FYE F KN+KLGIHED+ N+ KL ELLR++ST+SG+ +T+LKDYVTRMK  QN IYYITG+SKK +E+SPF+E+ K++G+EVL+M +  DEY + Q+K+FE KK    TKEG+  +ESE+EK+ +E  K   E LCK +K+VLG               PC LVT E+GW+A+ME++M+ QALRD+SMA YM SKKTME+NP++PI++ELR+R +AD+NDK+VKDLV LLF+
Sbjct:  406 YKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEVMTTLKDYVTRMKAEQNSIYYITGDSKKKLESSPFIEQAKRRGFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKRQREEEKATCEKLCKTMKEVLGDKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSMAQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFLLFD 640          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 4.542e-74
Identity = 136/236 (57.63%), Postives = 181/236 (76.69%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLLLFE 713
            F  FY++FSKNLKLGIHED+ N+  LA+LLRY+S  S D+L SL+DY+T+M E Q +IY+ITGESK+AVENSPFLE  + K ++VL+MVD IDEYAV QLKEFEGKKLV+ TK+GL+L+E+++EK  +E L++++E   K +K +LG               PC L TG+YGW+ANMERIMKAQALRD SM+ YMSS+KT EINP++PI+ EL+K+ + +   D+SVKDL  +L+E
Sbjct:  409 FKTFYDAFSKNLKLGIHEDAANRPALAKLLRYNSLNSPDDLISLEDYITKMPEHQKNIYFITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATILYE 644          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.012e-73
Identity = 131/235 (55.74%), Postives = 177/235 (75.32%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + +FYE F KN+KLGIHED+ N  KL E LR++ST+SG E+T+LKDYVTRMKEGQ  IYYITG+SKK +E+SPF+E+ +++G EVL+M + IDEY + Q+K+FE KK    TKEG+  +ESE+EK+ +E  K   E  CK +K+VLG               PC LVT E+GW+A+ME+IM+ QA+RD+SM+ YM SKKTME+NP +PI++ LR+R +AD+NDK+VKDLV LLF+
Sbjct:  158 YKQFYEQFGKNIKLGIHEDTANPKKLMEFLRFYSTESGLEMTTLKDYVTRMKEGQKSIYYITGDSKKKLESSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKRCKTMKEVLGDKVEKVTVSDRLSTSPCILVTSEFGWSAHMEQIMRNQAVRDSSMSAYMMSKKTMELNPRHPIIKVLRRRVEADENDKAVKDLVFLLFD 392          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 274.633 bits (701), Expect = 3.845e-73
Identity = 138/237 (58.23%), Postives = 181/237 (76.37%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLLLFE 713
            +F+KFY +FSKN+KLGIHED+ N+  LA+LLRY STKSGDE TSL DYVTRM E Q  IYYITGES KAV  SPFL+ LK+K +EVL++VD IDEYA  QLKEF+GKKLV  TK+  +L+E+E+EK  +E  ++++E L K +K++LG               PC + TG++GW+ANMERIMKAQALRD SM+ YMSSKKT EI+P++ I++EL+K+ +AD +ND++VK +  LLFE
Sbjct:  410 QFDKFYSAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQKQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDGKKLVDITKD-FELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSSIIKELKKKVEADGENDRTVKSITQLLFE 645          
The following BLAST results are available for this feature:
BLAST of FC931340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HSP83_DROME3.590e-7958.30Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP85_TRYCR2.327e-7857.87Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROAV3.039e-7857.87Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP90_PODAN2.573e-7760.34Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_TRYBB1.668e-7657.02Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP83_LEIIN1.081e-7556.60Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_LEIAM1.412e-7556.60Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP90_SCHPO4.542e-7457.63Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP83_LEIDO1.012e-7355.74Heat shock protein 83 (Fragment) OS=Leishmania don... [more]
HSP90_ASPFU3.845e-7358.23Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A11EF PostHarvP1 Citrus clementina cDNA clone C34104A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931340 ID=FC931340; Name=FC931340; organism=Citrus clementina; type=EST; length=744bp
AAGGAAGATTCAACAAGTTTTACGAGTCATTCTCTAAGAACCTAAAGCTT
GGTATCCACGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCG
ATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATG
TGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTGAG
AGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAA
GGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGTTG
GTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAA
GGTCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAGATGAAGGAAACCTT
GAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTG
ACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGC
TGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCAT
GAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCA
AGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGG
AAGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCT
TCTGCTCTTTGAGATGCTCTCTCACTTCTGGTTCAGCCTGATGA
back to top