FC931340

Overview
NameFC931340
Unique NameFC931340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.236e-43
Identity = 94/237 (39.66%), Postives = 140/237 (59.07%), Query Frame = 3
Query:   15 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK---MKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            KFY+ F   LK G+H D  NK KL EL+ + S+K+      SLK+YV RM E Q +IYYITG S+ A+ENSP LE  +KKG+EVLYM D +DE+ V  L +++GKKL +  +  L+LD +E++K+    +E  K++++G+   +K+ L                 CCLV  EYG  ANME+I+KA             SK+ +E+NP++P+M+ L    + DK +  + D   LL++
Sbjct:  385 KFYKEFGPVLKEGVHFDHANKEKLQELILFESSKTEAGNYISLKEYVARMPEAQKEIYYITGASRSALENSPHLEIFRKKGFEVLYMTDPVDEWVVQSLTDYDGKKLHAVDRGDLELDSAEEKKEKEAKQEEAKKQYQGVLDFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILKAM------NQDVPESKRVLELNPDHPLMQVLSSIFEKDKENPRLADYCGLLYD 615          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42
Identity = 96/238 (40.34%), Postives = 148/238 (62.18%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK-KLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRA-DADKNDKSVKDLVLLLFE 713
            ++N+F++ F  ++KLG  ED  NK +L + L + S+K  +ELT+   YV RMKEGQ+ IY+ITG+SK +VE SP +E+  KKGYEVL++VD IDEY V QL +F+ K K  +  + G+K +E ++E+  ++   E+F+ L   +K  L                P  LV+  +G TAN ERIMKAQA + N+   + +SKK MEINP +P++++L  R  +  + D++ K    +L+E
Sbjct:  462 KYNEFFKKFGSSMKLGAIEDQANKKRLTKYLLFPSSK--EELTTFAGYVERMKEGQDQIYFITGKSKDSVEASPLIEQAIKKGYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTLSDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQAHQANAQPQF-NSKKIMEINPSHPLIKKLLNRLNEFGEEDETTKVSAHVLYE 696          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.290e-40
Identity = 95/232 (40.95%), Postives = 138/232 (59.48%), Query Frame = 3
Query:   18 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            F+++F   LK G+  ++  K KL  LLRY S++  + LTSL DYV RMKEGQ  IYY+ GES+KAV +SP LE LK++G+EVLYM D +DE+A   L+EF+GK LVSA +  LKL  ++++KK +E   E  + L   +KDVL                P CLV  E G  A +ER+++ +       AG    K+ +E+NP++P++E L+   D D     V + + LL +
Sbjct:  382 FWKAFGTVLKEGLATEAEQKDKLGGLLRYESSRE-EGLTSLADYVGRMKEGQEAIYYVYGESRKAVADSPHLEALKQRGFEVLYMTDPVDEWAAQGLREFQGKPLVSALQADLKLQSTDEQKKEQEQHAEGLKTLTSKMKDVLQESVREVRVSDRLTDSPVCLVVPEGGSPAYLERLLQQR----GRGAGMPRVKRILEVNPKHPVIEHLKAVHDRDPAAAQVAEWIELLHD 608          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.803e-38
Identity = 94/219 (42.92%), Postives = 129/219 (58.90%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 653
            +  F+  F   LK G+  D+ NK KL +LL +HST S D++T++ +YV RMKE Q DIYYITG+S   V NSP+LEKLK+KG+EVL +VD +DE+ V  L EF+GKKL S  +EGL LD +E EK+ KE  K++ E   K +    K  L                P CLV      +A+M+++M   A      AG    K+ MEINP +P+ E++ K
Sbjct:  365 YEDFWTEFGATLKEGLPSDAANKEKLQDLLLFHSTSS-DKMTTMDEYVARMKETQKDIYYITGDSLSQVSNSPYLEKLKEKGFEVLLLVDPVDEWVVDALSEFKGKKLQSIMREGLDLDTAE-EKQQKEQEKKQAEVTLKPVLESMKKTLESDVKDVVLSDRLTNTPACLVASSADPSAHMQKLM---AQMGKEYAG-QQVKRIMEINPNHPVFEKMLK 577          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.803e-38
Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = 3
Query:   15 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEY 521
            K  E FSK   LGIHEDS N   L+ELL  H+ +SGDE+TSL +YV+ MKE Q  I  I GE K+ V NS F+E+  KKG+EV+YM + IDEY V QLKEF+GK L+S TKEGL+L E E+EKK+ E    KFE LC+++K++L                PC +VT  Y
Sbjct:  336 KLDEVFSKISWLGIHEDSINWRHLSELLWSHTFQSGDEMTSLSEYVSCMKEAQKSICDIIGECKEQVANSAFVEQEWKKGFEVIYMSEPIDEYCVQQLKEFDGKSLLSVTKEGLELPEDEEEKKIMEESNVKFENLCRLMKEILDKKVERVTISSRLVSSPCRIVTSTY 504          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.354e-38
Identity = 99/240 (41.25%), Postives = 136/240 (56.67%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            ++ +F++ F K +K G  ED  NK K+A LLR+ ST +  +  + SLKDYV RMKEGQ  IYYIT +S  A ++SP LE  +KKG EVL + D +DE+  G L EF+GK L S  K GL L E ED  EK  ++  +E  + L + IK +LG               P CLVTGE   +AN+ER++KA      ++      K T+EINP + ++  L   +D D+     KD   LLFE
Sbjct:  375 KYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEFDGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLLKAAGQAAPTV------KPTLEINPSHALVTRLDSESDEDR----FKDWANLLFE 604          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.245e-38
Identity = 88/177 (49.72%), Postives = 113/177 (63.84%), Query Frame = 3
Query:  198 ESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKE-----TLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            E+K  V NS  +++L K G EV+Y ++ IDEY V QLKEFEGK LVS TKE L+L E E+EKK +E     T ++K + L    K                           YGWTANMERIMKAQALRDNS  GYM++KK +EINP++  ++ LR++A+ DKNDKSVKDLV+LL+E
Sbjct:  205 ETKDQVANSTIVQRLWKHGLEVIYTIEPIDEYCVQQLKEFEGKTLVSVTKEDLELPEDEEEKKKQEEGKQKTKQKKNQSLRTSAKST-------------------------YGWTANMERIMKAQALRDNSTTGYMAAKKHLEINPDHSFIDTLRQKAETDKNDKSVKDLVILLYE 356          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 3
Query:  309 KEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            K+F+GKKL   TKEGL +  SE+ KK  ETLK ++EGLCKVIKDVL                PC LVT E+GW+ANMERIMKAQALRDNSM  YM SKK MEIN  +PI+  L+++ADADK+DK+VK L+ LLF+
Sbjct:    1 KDFDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVLHKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWLLFD 135          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRATT (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis GN=htpG PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
The following BLAST results are available for this feature:
BLAST of FC931340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_GEOUR9.236e-4339.66Chaperone protein htpG OS=Geobacter uraniireducens... [more]
ENPL_DICDI1.206e-4240.34Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_MYXXD4.290e-4040.95Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_BDEBA1.803e-3842.92Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
H90B4_HUMAN1.803e-3850.89Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]
HTPG_THIDA2.354e-3841.25Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HS904_HUMAN5.245e-3849.72Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HSP90_PLAFP8.946e-3859.26Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HTPG_FRATW1.168e-3738.67Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATT1.168e-3738.67Chaperone protein htpG OS=Francisella tularensis s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A11EF PostHarvP1 Citrus clementina cDNA clone C34104A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931340 ID=FC931340; Name=FC931340; organism=Citrus clementina; type=EST; length=744bp
AAGGAAGATTCAACAAGTTTTACGAGTCATTCTCTAAGAACCTAAAGCTT
GGTATCCACGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCG
ATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATG
TGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTGAG
AGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAA
GGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGTTG
GTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAA
GGTCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAGATGAAGGAAACCTT
GAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTG
ACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGC
TGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCAT
GAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCA
AGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGG
AAGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCT
TCTGCTCTTTGAGATGCTCTCTCACTTCTGGTTCAGCCTGATGA
back to top