FC931340

Overview
NameFC931340
Unique NameFC931340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_AZOSE (Chaperone protein htpG OS=Azoarcus sp. (strain EbN1) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 91/219 (41.55%), Postives = 128/219 (58.45%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 650
            ++  F++ F   LK G+ ED  NK K+A LLR+ ST +   DE+ SL DY+ RMKEGQ+ IYY+T ES  A +NSP LE  +KKG EVL + D +DE+ +G L EF+GK LVS  K GL L + EDE + KET K  ++++ L + +K  LG               P CLV  E+    N+ RI+KA   +        +SK  +EINP++P +  L+
Sbjct:  387 KYATFWKEFGPVLKEGVGEDFANKDKIAGLLRFASTHADTPDEVVSLADYLARMKEGQDKIYYVTAESFNAAKNSPHLEIFRKKGIEVLLLTDRVDEWVIGNLPEFDGKALVSVAKGGLDLGKLEDEAEKKETEKAADEYKELLEKMKASLGERVKEVRVTHRLTDSPACLVADEHDVGMNLARILKAAGQQ------APASKPILEINPQHPAVMRLK 599          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRATN (Chaperone protein htpG OS=Francisella tularensis subsp. novicida (strain U112) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37
Identity = 88/225 (39.11%), Postives = 135/225 (60.00%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+        M G M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKETKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG--QGFMPG-MGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRAP2 (Chaperone protein htpG OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37
Identity = 89/225 (39.56%), Postives = 135/225 (60.00%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DYV+RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+        M G M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTESGDAKQTVSLADYVSRMKEGQDTIYYITSDSYKAAVNNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG--QGFMPG-MGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.399e-37
Identity = 91/224 (40.62%), Postives = 127/224 (56.70%), Query Frame = 3
Query:    3 GRFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 662
            G++  F+  F + LK G  ED  NK ++A LLR+ ST  G   T  SL+DY++RMKEGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T+  L+L E ED  +K+ K+ + E+ +GL + +K  LG               P C+V GE   +  M ++M+A             SK T EINP +P++  L   AD
Sbjct:  378 GQYQSFWAEFGQVLKEGPAEDFANKERIAGLLRFASTHEGSAATTVSLEDYISRMKEGQDKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFKGKKLHSVTRGDLELGELEDAADKEAKDKITEEAKGLVERMKAALGAKVSEVKVTTRLTDTPACVVAGEGEMSTQMIKLMQAAG------QAVPESKPTFEINPNHPLVARLNDEAD 595          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.440e-37
Identity = 92/226 (40.71%), Postives = 127/226 (56.19%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 671
            ++  F+  F + LK G  ED  NK ++A LLR+ ST +G+     SL DYV RMKEGQ+ IY+I  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T+  L+L E ED  EK+ +E L+ + EGL K +KD LG               P C+V GE   +  M ++M+A             SK T E+NPE+P++  L    D  +
Sbjct:  381 KYQSFWTEFGQVLKEGPAEDFANKERVAGLLRFASTHTGEATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKVTTRLTDTPACVVAGEGEMSTQMIKLMQAAG------QDVPESKPTFELNPEHPLVARLNDEQDEQR 600          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.440e-37
Identity = 96/239 (40.17%), Postives = 135/239 (56.49%), Query Frame = 3
Query:   18 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            F++ F   LK G+H D  NK KL EL  + ST +     TSLK+YV RM E Q +IY+ITG+S+  ++ SP LE  K KGYEVL++ D +DE+ V  L E++ KKL +  +  + LD SE+EKK KET +E    ++  L   IK  L                 CCLV  EYG  ANMERI+KA  Q + D        SK+ +E+NP++PIM+ + +    +K D  + D   LL++
Sbjct:  386 FWKEFGPVLKEGLHFDYANKEKLQELALFESTATEAGSFTSLKEYVERMPEAQQEIYFITGDSRATLKISPHLEAFKAKGYEVLFLTDPVDEWVVQALTEYKEKKLKAVDRGDVDLD-SEEEKKEKETKQEEARKEYGDLISFIKSHLEDRVKDARLSKRLTDSACCLVADEYGINANMERILKAMNQPVPD--------SKRVLELNPDHPIMKIMTEIFRENKEDARLTDYADLLYD 615          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37
Identity = 91/237 (38.40%), Postives = 131/237 (55.27%), Query Frame = 3
Query:   18 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            FY+ F   LK G+H D  N+ KL +LL + ST +      SLK+YV RM EGQ +IY+ITG S+ A+E SP LE  +KKGYEVL++ D +DE+ V  L E+ GKKL  A   G  +  +E+EKK +E  +E    ++  L   +K+ L                 CCLV  E+G  ANMERI++A             SK+ +E+NP++PIM+ +      DK +  + D   LL++
Sbjct:  387 FYKEFGPVLKEGVHFDYANRDKLQDLLLFESTATDAGSFVSLKEYVERMPEGQEEIYFITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWVVQGLPEYGGKKL-KAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLAERVKEVRLSNRLTDSACCLVADEHGLNANMERILRAM------NQTVPESKRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYD 616          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_MARMS (Chaperone protein htpG OS=Marinomonas sp. (strain MWYL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.573e-37
Identity = 92/239 (38.49%), Postives = 132/239 (55.23%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL--DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            + KF++ F   +K G  +D  NK K+A LLR+ ST +    +  SL DY+ RM+EGQ+ IYYI  ES    +NSP LE L+KKG+EVL + D IDE+ +  L+EFEGK     TK  L L   E+E+EKK KE   EK + L   +K VL                P CLV GEY     M R+++    +         SK T+E+NP++PI+ ++    D++ +++   D+  LLFE
Sbjct:  385 YQKFWDEFGNVIKEGPADDMGNKDKIAGLLRFSSTHTDAAAQTVSLADYIERMQEGQDKIYYIYAESHNTAKNSPHLEILRKKGFEVLLLSDRIDEWMMSSLQEFEGKSFQDVTKGKLDLADQENEEEKKEKEEKAEKMKPLLDRMKAVLNEKVAGVNSTDRLTNSPACLVVGEYDMGLQMRRLLEQAGQK------LPESKPTLEVNPDHPIVAKM----DSETDEERFADMAWLLFE 613          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.891e-37
Identity = 90/240 (37.50%), Postives = 138/240 (57.50%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE--KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            ++ +F++ F + LK G+ ED  NK ++A+LLR+ ST S D     SL DY+ RMKEGQ+ IYYIT ++  A +NSP LE  KKKG EVL + D +DE+  G L EF+GK L S  K  L L   EDE  K+ ++ ++E  + + + ++  LG               P CLV GE+  +A++ER++KA   +         SK T+EINPE+ +++ L + +D    +    DL  +L++
Sbjct:  373 KYAEFWKEFGQVLKEGVGEDFANKERIAKLLRFVSTASEDAEPTVSLADYIGRMKEGQDKIYYITADTLAAAKNSPHLEVFKKKGVEVLLLTDRVDEWVTGSLFEFDGKALQSVAKGALDLGALEDEADKEAQKQVEEASKPVVEKVQKALGDKVKEVRATARLVESPACLVAGEHDMSAHLERMLKAAGQK------IEGSKPTLEINPEHVLVKRLAEESD----EARAGDLAAVLYD 602          
The following BLAST results are available for this feature:
BLAST of FC931340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_FRAT11.168e-3738.67Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_AZOSE1.168e-3741.55Chaperone protein htpG OS=Azoarcus sp. (strain EbN... [more]
HTPG_FRATN1.526e-3739.11Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAP21.526e-3739.56Chaperone protein htpG OS=Francisella philomiragia... [more]
HTPG_SHEDO3.399e-3740.63Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_SHEHH4.440e-3740.71Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_PELPD4.440e-3740.17Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_GEOSL5.799e-3738.40Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_MARMS7.573e-3738.49Chaperone protein htpG OS=Marinomonas sp. (strain ... [more]
HTPG_CHRVO9.891e-3737.50Chaperone protein htpG OS=Chromobacterium violaceu... [more]

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Properties
Property NameValue
Genbank descriptionC34104A11EF PostHarvP1 Citrus clementina cDNA clone C34104A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931340 ID=FC931340; Name=FC931340; organism=Citrus clementina; type=EST; length=744bp
AAGGAAGATTCAACAAGTTTTACGAGTCATTCTCTAAGAACCTAAAGCTT
GGTATCCACGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCG
ATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATG
TGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTGAG
AGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAA
GGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGTTG
GTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAA
GGTCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAGATGAAGGAAACCTT
GAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTG
ACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGC
TGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCAT
GAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCA
AGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGG
AAGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCT
TCTGCTCTTTGAGATGCTCTCTCACTTCTGGTTCAGCCTGATGA
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