FC931340

Overview
NameFC931340
Unique NameFC931340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.687e-36
Identity = 90/223 (40.36%), Postives = 125/223 (56.05%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE--DEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 662
            ++  F+  F + LK G  ED  NK ++A LLR+ ST +G+     SL DY+ RM+EGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GKKL S T+  L+L E E  DEK+ +E L+ + EGL K +KD LG               P C+V GE   +  M ++M+A              K T E+NPE+P++  L    D
Sbjct:  380 KYQSFWTEFGQVLKEGPAEDFANKERIAGLLRFASTHTGEATPNVSLADYIERMQEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEFDGKKLHSVTRGDLELGELEDDDEKEAQEKLQTESEGLVKRVKDSLGDKVSEVKVTTRLTDTPACVVAGEGEMSTQMIKLMQAAG------QDVPEPKPTFELNPEHPLVARLNDEQD 596          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.687e-36
Identity = 90/225 (40.00%), Postives = 127/225 (56.44%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++  F+  F + LK G  ED  NK K+A LLR+ ST + +     SL DYV RMKEGQ+ IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L EF+GK+L S T+  L+L E ED  EK+ +E L+ + EGL K +K+VLG               P C+V G    ++ M ++M+A             SK   E+NPE+P+++ L    D +
Sbjct:  381 KYQTFWAEFGQVLKEGPAEDFANKEKIAGLLRFASTHTNEAAHTVSLSDYVERMKEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLSEFDGKQLHSVTRGDLELGELEDAAEKEAQEKLETESEGLVKRVKEVLGDKVAEVKVTSRLTDTPACVVAGAGEMSSQMIKLMQAAG------QAVTESKPVFELNPEHPLVKRLDTEQDEE 599          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 88/237 (37.13%), Postives = 134/237 (56.54%), Query Frame = 3
Query:   18 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            FY+ F + LK G+H D  N+ KL +LL + ST++   + TSLK+YV RM  GQ +IY+ITG S+ A+E SP LE  +KK YEVL++ D +DE+ V  + E++GKKL  A   G  +  +E+EKK +E  +E    ++  L   +K+ L                 CCLV  E+G  ANMERI++A             SK+ +E+NP++P+M+ +      DK +  + D   LL++
Sbjct:  387 FYKEFGQVLKEGVHFDYANREKLQDLLLFESTRTEAGKFTSLKEYVERMPAGQEEIYFITGTSRTALEQSPHLEIFRKKEYEVLFLTDPVDEWVVQGVTEYDGKKL-KAVDRGDVIPATEEEKKEQEAKREEAFKQYGDLLSFVKEKLDARVKEVRLSSRLTDSACCLVADEHGLNANMERILRAM------NQDVPESKRILELNPDHPLMQVMANLFARDKANPRLGDYCDLLYD 616          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRATH (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain LVS) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 85/225 (37.78%), Postives = 132/225 (58.67%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKE Q+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+ K + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKESQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDDKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_FRATF (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 85/225 (37.78%), Postives = 132/225 (58.67%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            ++ KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKE Q+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+ K + S  K  + LD  E+ + K+  E   + FE + K IK+VL                P C+V  +YG + +M+++M+       S    M  K  +E+N E+ ++++L+  AD +
Sbjct:  371 KYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKESQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDDKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEEAG---QSFMPGMGMKPILELNAEHNLVQKLKNEADTE 592          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 92/242 (38.02%), Postives = 131/242 (54.13%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM--SSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFE 713
            ++ +FY +F K LK G+ ED  N+ ++A+LLR+ +T+  +E    SL DY+ RMKEGQ  IYY+T ES  A  NSP LE  +KKG EVL + D +DE+ +  L E++GK L S  K GL L E ED  EKK  E   E  + L + +K  L                P CLV GEY +   M+R++KA        AG+     K  +EIN ++PI++    R D   +D    D   +L++
Sbjct:  382 QYAEFYGNFGKVLKEGVAEDFANRERIAKLLRFSTTQDENETPDVSLDDYIARMKEGQEAIYYVTAESFNAARNSPHLEVFRKKGVEVLLLPDPVDEWVITHLNEYDGKPLKSVAKGGLDLGELEDQAEKKAAEEATESHKDLLEKLKGALEDKVSEVRVSTRLTDSPACLVVGEYDFGMGMQRLLKA--------AGHAMPQGKPALEINIDHPIVQ----RMDTGLDDARFSDWAAVLYD 611          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: ENPLL_HUMAN (Putative endoplasmin-like protein OS=Homo sapiens GN=HSP90B2P PE=5 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 86/233 (36.91%), Postives = 131/233 (56.22%), Query Frame = 3
Query:   18 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDN---SMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 704
            F++ F  N+KLG+ ED +N+T LA+LLR+ S+    ++TSL   V RMKE Q+ I  + G                  GYEV+Y+ + + EY +  L EF+GK+  +  KEG+K D+SE  K+  E ++++FE L   +KD  +                 C LV  +YGW+ NMERIMKAQA +     S   + S KKT EINP +P++ ++ +R   D++DK+V DL ++
Sbjct:  141 FWKEFGTNIKLGVIEDHSNRTCLAKLLRFQSSHHPADITSLHQDVERMKEKQDKICLMAG------------------GYEVIYLTEPVVEYCIQALPEFDGKRFQNVAKEGVKFDDSEKTKESHEAVEKEFEPLPNWVKDKAIKDKIEKAMVSQCLTESLCALVASQYGWSGNMERIMKAQAYQTGKGISTNYHASRKKTFEINPRHPLIRDMLRRIKEDEDDKTVLDLAVV 355          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_SHESH (Chaperone protein htpG OS=Shewanella sediminis (strain HAW-EB3) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.411e-36
Identity = 90/223 (40.36%), Postives = 126/223 (56.50%), Query Frame = 3
Query:    6 RFNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 662
            ++  F+  F + LK G  ED  NK ++A LLR+ ST + D     SL DYV+RM+EGQ+ IYYI  +S +A  NSP LE L+KKG EV+ M + IDE+ +  L +F+GK+L S T+  L+L + ED  EK+ +E L+ + EGL K IKD LG               P C+V GE   +  M ++M+A             SK T EINPE+P++  L    D
Sbjct:  380 KYQTFWAEFGQVLKEGPAEDMVNKERIAGLLRFASTHTEDAAPTVSLADYVSRMQEGQSKIYYIVADSHEAAANSPHLELLRKKGIEVVLMSERIDEWLINHLTDFDGKQLHSVTRGDLELGDLEDAGEKEAQEKLETESEGLVKRIKDSLGEKVSAVKVTTRLTDTPACVVAGEGEMSTQMIKLMEAAG------QAVPESKPTFEINPEHPLVARLNDEQD 596          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.373e-36
Identity = 85/221 (38.46%), Postives = 130/221 (58.82%), Query Frame = 3
Query:   18 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 668
            F+  F + LK G+ ED +N+ ++A+LLR+ ST +GD  + TSL+DY+ R+KEGQ+ IYY+T +S  A  NSP LE  +KKG EVL + D +DE+ +  L+EFEGK LVS  K GL L +   E+EKK +  + E F+ L + ++  LG               P C+V G+   + ++ R++KA       +      K  +EINPE+ ++  +R  +DAD
Sbjct:  379 FWGEFGQVLKEGVGEDPSNQERIAKLLRFASTHAGDASQTTSLQDYLGRLKEGQDKIYYVTADSYSAASNSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREFEGKSLVSVAKGGLDLADLADEEEKKKQTEVAESFKPLIERLQTALGEQVKEVRVTLRLVDSPACVVVGQNDLSPHLLRMLKAAGQEVPEV------KPVLEINPEHALIARIRDVSDAD 593          
BLAST of FC931340 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.428e-35
Identity = 87/225 (38.67%), Postives = 130/225 (57.78%), Query Frame = 3
Query:    9 FNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 671
            + KF++ F + LK G  ED  NK ++A LLR+ ST +   +++ S KDY+ RMKEGQ  IYYIT +S  A ++SP LE  +KKG EVL + D +DE+ V  L EF+GKKL S  K  L L + ED  EK+ ++  +++++ L + I+  LG               P CLV GE+  + N+ER++KA   +         SK  +EINP++ I++ L+   D  K
Sbjct:  375 YAKFWKEFGRVLKEGPGEDFANKERIAGLLRFASTHADTDEQVVSFKDYIARMKEGQEAIYYITADSFAAAKHSPHLEIFRKKGIEVLLLSDRVDEWLVSSLTEFDGKKLQSVAKGDLDLGKLEDEAEKEQQKKTEDEYKPLVERIQAALGDSVKEVRVTHRLTDSPACLVAGEHDLSGNLERLLKAAGQKT------PGSKPILEINPDHGIVQRLKDVTDEAK 593          
The following BLAST results are available for this feature:
BLAST of FC931340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_SHEPA1.687e-3640.36Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_SHELP1.687e-3640.00Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_GEOMG3.759e-3637.13Chaperone protein htpG OS=Geobacter metallireducen... [more]
HTPG_FRATH3.759e-3637.78Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATF3.759e-3637.78Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_ALHEH3.759e-3638.02Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
ENPLL_HUMAN3.759e-3636.91Putative endoplasmin-like protein OS=Homo sapiens ... [more]
HTPG_SHESH6.411e-3640.36Chaperone protein htpG OS=Shewanella sediminis (st... [more]
HTPG_BORA18.373e-3638.46Chaperone protein htpG OS=Bordetella avium (strain... [more]
HTPG_METFK1.428e-3538.67Chaperone protein htpG OS=Methylobacillus flagella... [more]

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Properties
Property NameValue
Genbank descriptionC34104A11EF PostHarvP1 Citrus clementina cDNA clone C34104A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931340 ID=FC931340; Name=FC931340; organism=Citrus clementina; type=EST; length=744bp
AAGGAAGATTCAACAAGTTTTACGAGTCATTCTCTAAGAACCTAAAGCTT
GGTATCCACGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCG
ATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATG
TGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTGAG
AGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAA
GGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGTTG
GTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAA
GGTCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAGATGAAGGAAACCTT
GAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTG
ACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGC
TGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCAT
GAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCA
AGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGG
AAGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCT
TCTGCTCTTTGAGATGCTCTCTCACTTCTGGTTCAGCCTGATGA
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