FC931342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10_BOVIN (40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28 Identity = 59/101 (58.42%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAKPT 390 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR Y +LP EIVPATL++ T Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET 101
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10B_DROME (40S ribosomal protein S10b OS=Drosophila melanogaster GN=RpS10b PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27 Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAK 384 M +P+ +R I +YLF+EGV AKKD++ KHPE++ +PNL VIK MQS S+ V+E FAW HYYWYLTNEGIE LR Y +LP EIVP+TLK+ A+ Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPAR 97
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10_XENLA (40S ribosomal protein S10 OS=Xenopus laevis GN=rps10 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.276e-27 Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAKPT 390 M++P+K+R I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR + +LP EIVPATL++ T Sbjct: 1 MLMPKKDRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPET 101
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10B_SCHPO (40S ribosomal protein S10-B OS=Schizosaccharomyces pombe GN=rps10b PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.535e-26 Identity = 54/97 (55.67%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAKP 387 M+IP++NR+ I + LFQ+GV AKKD+NL KHPE+ VPNLQVIK QS S+ Y++ + W +Y+ LTNEG+E+LR Y +LP+E+VPAT K+Q +P Sbjct: 1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRP 97
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10A_SCHPO (40S ribosomal protein S10-A OS=Schizosaccharomyces pombe GN=rps10a PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.535e-26 Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAKPT 390 M+IP++NR+ I + LF +GV AKKD+NL KHPE+ VPNLQVIK QS S+ Y++ + W +Y+ LTNEG+E+LR Y +LP+E+VPAT K+Q +PT Sbjct: 1 MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPT 98
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10_DICDI (40S ribosomal protein S10 OS=Dictyostelium discoideum GN=rps10 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26 Identity = 53/95 (55.79%), Postives = 75/95 (78.95%), Query Frame = 1 Query: 100 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQA 381 +IP +N+ I +YLFQEGV A KD++LAKHP+I+ V NL V+++++SFKS+++V ETF W +YYW LT EGI++LR Y +P +VPAT+KKQA Sbjct: 3 LIPTENKLAIYRYLFQEGVLVAPKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFNWQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA 97
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10L_HUMAN (Putative 40S ribosomal protein S10-like protein OS=Homo sapiens GN=RPS10P5 PE=5 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATL 369 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ V+E FAW H+YWYLTNEG ++LR Y +LP EIVPATL Sbjct: 1 MLMPKKNRIAIHELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGCVKEQFAWRHFYWYLTNEGSQYLRDYLHLPPEIVPATL 94
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10A_YEAST (40S ribosomal protein S10-A OS=Saccharomyces cerevisiae GN=RPS10A PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAKPT 390 M++P+++R +I +YLFQEGV AKKD+N AKH EID NL VIK +QS SK YV+ F+W +YY+ LT EG+E+LR Y NLP IVP T ++ PT Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPT 98
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10A_DROME (40S ribosomal protein S10a OS=Drosophila melanogaster GN=RpS10a PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.217e-25 Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAK 384 M IP+ NR I +YLF+EGV AKKD + KH E+D +PNLQVIK+MQS S+ +V+E FAW H+YW LTNEGIE LR Y +LP EIVP+TL + + Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTR 97
BLAST of FC931342 vs. ExPASy Swiss-Prot
Match: RS10B_YEAST (40S ribosomal protein S10-B OS=Saccharomyces cerevisiae GN=RPS10B PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25 Identity = 53/98 (54.08%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 97 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYPNLPSEIVPATLKKQAKPT 390 M++P++ R +I +YLFQEGV AKKD+N AKH EID NL VIK +QS SK YV+ F+W +YY+ LT EG+E+LR Y NLP IVP T ++ P+ Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPS 98 The following BLAST results are available for this feature:
BLAST of FC931342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931342 ID=FC931342; Name=FC931342; organism=Citrus clementina; type=EST; length=731bpback to top |