FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 8.227e-73
Identity = 138/210 (65.71%), Postives = 158/210 (75.24%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            ++R+V ARAYH+LFM NM IRP  EELE F  PD+TIYNAG FP NRYT  M+SSTS+ IN A KEMVILGT+YAGEMKKG+F++M Y  P K  IL+LHS  N GKDGDV                D NR LIGDDEHCWSD GV NIEGGCYAK I LS EKEPDI+NAI++G+VLEN+VF+  TREVDY D ++TENTR AYPIEYI
Sbjct:  149 RVRVVCARAYHALFMRNMLIRPPREELEHFH-PDYTIYNAGSFPANRYTEGMSSSTSVAINFAEKEMVILGTEYAGEMKKGIFTVMFYEGPVKHNILTLHSSANEGKDGDVTLFFGLSGTGKTTLSADPNRRLIGDDEHCWSDRGVFNIEGGCYAKTIGLSAEKEPDIFNAIRYGSVLENVVFNPETREVDYGDATLTENTRCAYPIEYI 357          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.083e-72
Identity = 131/210 (62.38%), Postives = 156/210 (74.29%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RIV  RAYH+LFM NM IRPT EEL +FG PDFT++NAGQFP N +T  M+S T+++IN    EMVILGT+YAGEMKKG+F++M YLMP    +L+LHS  N G + DV                D +R LIGDDEHCWSD GV NIEGGCYAKCI LS EKEP+I+NAIK+G+VLEN+V+D  TR VDY D S+TENTR AYPIEYI
Sbjct:  128 KIRIVCCRAYHALFMTNMLIRPTEEELAEFGEPDFTVWNAGQFPANTHTEGMSSKTTVEINFRAMEMVILGTEYAGEMKKGIFTVMFYLMPINHNVLTLHSSANQGPNNDVTLFFGLSGTGKTTLSADQHRKLIGDDEHCWSDYGVFNIEGGCYAKCIGLSGEKEPEIFNAIKYGSVLENVVYDPVTRVVDYEDSSITENTRCAYPIEYI 337          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_EMENI (Phosphoenolpyruvate carboxykinase [ATP] OS=Emericella nidulans GN=acuF PE=3 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.313e-70
Identity = 131/209 (62.68%), Postives = 158/209 (75.60%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V ARAYH+LFM NM IRP++EEL+ F  PD+ IYNAG FP NR+T  MTS+TS+ IN A KEMVILGT+YAGEMKKG+F+++ Y MP K  +L+LHS  N G++GDV                D  R LIGDDEHCW+D GV NIEGGCYAKCI LS EKEPDI+NAI+FG+VLEN+VFD  +R VDY D ++TENTR AYPIEYI
Sbjct:  145 VRVVCARAYHALFMRNMLIRPSAEELKHFH-PDYVIYNAGSFPANRFTEGMTSATSVAINFAEKEMVILGTEYAGEMKKGVFTILFYEMPVKHNVLTLHSSANEGQNGDVTVFFGLSGTGKTTLSADPKRALIGDDEHCWTDRGVFNIEGGCYAKCIGLSAEKEPDIFNAIRFGSVLENVVFDPISRVVDYDDSTLTENTRCAYPIEYI 352          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 1.715e-70
Identity = 128/211 (60.66%), Postives = 160/211 (75.83%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R+V ARAYH+LFM NM IRPT EEL  FG PDFT++NAGQFP N +T  M+S ++I+IN    EM+ILGT+YAGEMKKG+F++M YLMP    +L+LHS  N G ++GDV                D +R LIGDDEHCWSD+GV NIEGGCYAKCI+LS EKEP+I++AIKFG+VLEN+++DE +  VDY D S+TENTR AYPI+YI
Sbjct:  134 KVRVVCARAYHALFMTNMLIRPTEEELAHFGEPDFTVWNAGQFPANLHTQDMSSKSTIEINFKAMEMIILGTEYAGEMKKGIFTVMFYLMPVHHNVLTLHSSANQGIQNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCINLSAEKEPEIFDAIKFGSVLENVIYDEKSHVVDYDDSSITENTRCAYPIDYI 344          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_THETN (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoanaerobacter tengcongensis GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.102e-56
Identity = 102/208 (49.04%), Postives = 142/208 (68.27%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++  AY SL    + IRPT +EL++F  P++T+  A +F        + S   I ++  +K ++I GTQY GE+KK +F+LM+YLMPK+ +LS+H   N+GKDGD A               D  R+LIGDDEH WS+ G+ N EGGCYAKCI+LSREKEP IW++I+FG +LEN+V+DE TRE+DY    +TENTRAAYPI++I
Sbjct:  115 IRVITEYAYQSLMARQLFIRPTEKELQNF-VPEYTLIAAPRFKAIPEIDGVNSEAFIILSFTKKLIIIGGTQYGGEIKKSIFTLMNYLMPKKGVLSMHCSANIGKDGDTALFFGLSGTGKTTLSADPERFLIGDDEHGWSERGIFNFEGGCYAKCINLSREKEPQIWDSIRFGAILENVVYDEATRELDYTSDKITENTRAAYPIDFI 321          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_TRYBB (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.659e-55
Identity = 103/209 (49.28%), Postives = 136/209 (65.07%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R+ + R YH+LFM NM I PT EEL+ FG PD+ IYNAG+   +     +TS+TS+ +N   +E VILGT+YAGEMKKG+ ++M  LMP+   L +H+  N+GK GDV                D  R LIGDDEH W+D GV NIEGGCYAK I L+ E E DI+ A++FG V EN   D  T E+D+ D+S+ +NTR AYP+ +I
Sbjct:  107 KVRVYTTRPYHALFMRNMLIVPTLEELQSFGEPDYVIYNAGEAKADPTVPGVTSTTSVALNFKTREQVILGTEYAGEMKKGILTVMFELMPRMGHLCMHASANVGKSGDVTVFFGLSGTGKTTLSADPRRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPETEKDIYEAVRFGAVAENCTLDRRTHEIDFNDESICKNTRVAYPLMHI 315          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACCN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pckA PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 105/208 (50.48%), Postives = 145/208 (69.71%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++V+  A+H+LF+H + IRPT EEL +   P FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D +R LIGDDEH WSDNGV NIEGGCYAKCI+LS EKEP I++AIKFG+VLEN++ D+ TR  DY D ++TENTRAAYPI+ I
Sbjct:  121 IQVVNEYAWHNLFVHQLFIRPTEEELANHNAP-FTIVSAPNFKADPAVDGTNSEAFIIVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWSDNGVFNIEGGCYAKCINLSHEKEPQIFDAIKFGSVLENVIVDDKTRIADYSDTALTENTRAAYPIDAI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_TRYCR (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma cruzi GN=PEPCK PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.723e-54
Identity = 101/209 (48.33%), Postives = 138/209 (66.03%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R+ + R YH+LFM +M I PT EEL  FG PD+ IYNAG+   +     +TS+T + +N   +E VILGT+YAGEMKKG+ ++M  LMP+   L +H+  N+GK GDV                D +R LIGDDEH W+D GV NIEGGCYAK I L+ + E DI++A++FG V EN V D+ T E+D+ D+S+ +NTR AYP+ +I
Sbjct:  107 KVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKADPSIPGLTSTTCVALNFKTREQVILGTEYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFFGLSGTGKTTLSADPHRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHI 315          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.014e-54
Identity = 106/208 (50.96%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF H + IRPT EEL      DFT+ +A  F  +       S T I ++L +K ++I GT+YAGEMKK +F +M+YL+P++ ILS+H   N+G+ GDVA               D +R LIGDDEH WSDNGV NIEGGCYAK I+LS EKEP+I+NAI+FG+VLEN+  D  TR  DY D S+TENTR AYPI+YI
Sbjct:  121 IQVINEYAWHNLFAHQLFIRPTKEELASH-VADFTVISAPNFKADPAVDGTASETFIIVSLEKKIILIGGTEYAGEMKKSIFGIMNYLLPQQGILSMHCSANVGEAGDVALFFGLSGTGKTTLSADPDRKLIGDDEHGWSDNGVFNIEGGCYAKTINLSAEKEPEIYNAIRFGSVLENVAVDPETRICDYDDGSLTENTRVAYPIQYI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BREBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pckA PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.489e-53
Identity = 105/208 (50.48%), Postives = 136/208 (65.38%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V+  A+H+LF   + IRP+ EEL    + +FT+  A  F  N   H   S T I ++  +K ++I GT+YAGEMKK +FS+M+ L+P+R +L +H   N+GKDGDVA               D +R+LIGDDEH WSDNGV NIEGGCYAKC+ LS E EP IW AI+FGTVLEN+  +E TR  DY     TENTRAAYP+E I
Sbjct:  120 IRVVNEFAWHNLFARQLFIRPSEEELAAHES-EFTVIYAPNFKANPAVHGTNSETFIVLSFEQKTVLIGGTEYAGEMKKSIFSVMNMLLPERNVLPMHCSANVGKDGDVALFFGLSGTGKTTLSADPDRFLIGDDEHGWSDNGVFNIEGGCYAKCVKLSEEGEPQIWKAIQFGTVLENVDVNEATRVADYDSTKYTENTRAAYPVEAI 326          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_NEUCR8.227e-7365.71Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]
PCKA_ASHGO4.083e-7262.38Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]
PCKA_EMENI1.313e-7062.68Phosphoenolpyruvate carboxykinase [ATP] OS=Emerice... [more]
PCKA_YEAST1.715e-7060.66Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]
PCKA_THETN4.102e-5649.04Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoa... [more]
PCKA_TRYBB2.659e-5549.28Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_BACCN5.923e-5550.48Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_TRYCR1.723e-5448.33Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_LYSSC5.014e-5450.96Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_BREBN2.489e-5350.48Phosphoenolpyruvate carboxykinase [ATP] OS=Breviba... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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