FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PSEAB (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pckA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 89/208 (42.79%), Postives = 129/208 (62.02%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++ +A A+ +LF   + I P  E+    G  ++ + N   F C        S   + +N A+K+++I G +YAGEMKK +FS+ ++L+P+R +L +H   N+G+ GDV                D +RYLIGDDEH W +  V N+EGGCYAKCIDLS + EP IW AIKFG VLEN+V DE  R  +Y D S+T+N+RAAYP+E++
Sbjct:  109 VKMTTATAWQNLFGRCLFIEP--EQYNPAGKDEWQVLNVANFECVPERDGTNSDGCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPERDVLPMHCAANIGEAGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNVEGGCYAKCIDLSEKNEPVIWKAIKFGAVLENVVLDEE-RVPNYADDSLTQNSRAAYPLEHV 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PSEA8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas aeruginosa (strain LESB58) GN=pckA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 89/208 (42.79%), Postives = 129/208 (62.02%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++ +A A+ +LF   + I P  E+    G  ++ + N   F C        S   + +N A+K+++I G +YAGEMKK +FS+ ++L+P+R +L +H   N+G+ GDV                D +RYLIGDDEH W +  V N+EGGCYAKCIDLS + EP IW AIKFG VLEN+V DE  R  +Y D S+T+N+RAAYP+E++
Sbjct:  109 VKMTTATAWQNLFGRCLFIEP--EQYNPAGKDEWQVLNVANFECVPERDGTNSDGCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPERDVLPMHCAANIGEAGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNVEGGCYAKCIDLSEKNEPVIWKAIKFGAVLENVVLDEE-RVPNYADDSLTQNSRAAYPLEHV 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PORGI (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis GN=pckA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 96/211 (45.50%), Postives = 126/211 (59.72%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R +   A+ + F+ NM IRPT EEL ++G PDF +  A +     Y    + S T++  NL  K  VIL T Y GEMKKG+FS M+YL+P R + S+H   N   D  + A               D  R LIGDDEH W  +G+ N EGGCYAK I+LSRE EPDI+NAI+   +LEN+  D    ++D+ DKSVTENTR +YPI +I
Sbjct:  127 KIRFIMEVAWQAHFVKNMFIRPTEEELANYGEPDFVVMTASKAKVENYKELGLNSETAVVFNLTEKVQVILNTWYGGEMKKGMFSYMNYLLPLRGMASMHCSANTSMDEKETAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDKDGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHI 336          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PORG3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=pckA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 96/211 (45.50%), Postives = 126/211 (59.72%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R +   A+ + F+ NM IRPT EEL ++G PDF +  A +     Y    + S T++  NL  K  VIL T Y GEMKKG+FS M+YL+P R + S+H   N   D  + A               D  R LIGDDEH W  +G+ N EGGCYAK I+LSRE EPDI+NAI+   +LEN+  D    ++D+ DKSVTENTR +YPI +I
Sbjct:  127 KIRFIMEVAWQAHFVKNMFIRPTEEELANYGEPDFVVMTASKAKVENYKELGLNSETAVVFNLTEKVQVILNTWYGGEMKKGMFSYMNYLLPLRGMASMHCSANTSMDEKETAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDKDGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHI 336          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SHELP (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 90/208 (43.27%), Postives = 128/208 (61.54%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            + + +  A+H LF  N+ I P  E+      P + I NA  F C+       S  ++ IN A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G +GD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+  DE  R  DY +  +TEN+RAAYP+E+I
Sbjct:  109 IEVKTETAWHQLFARNLFIVP--EQFNVANKPVWQIMNAPGFECDPARDGTNSDATVIINFADRKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGSEGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVTLDEQ-RIPDYSNTELTENSRAAYPLEHI 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPT (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain TIE-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 95/210 (45.24%), Postives = 129/210 (61.43%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP   ELE+F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P++ +L +H   N+G +GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V  E  R+ D+ D S TENTR+AYP+E I
Sbjct:  123 KTRVYTELAWHSLFIRTLLRRPERAELENF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPEKGVLPMHCSANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAENEPEIYAASTRFGAVLENVVLGEIDRKPDFDDGSKTENTRSAYPLESI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris GN=pckA PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 95/210 (45.24%), Postives = 129/210 (61.43%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP   ELE+F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P++ +L +H   N+G +GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V  E  R+ D+ D S TENTR+AYP+E I
Sbjct:  123 KTRVYTELAWHSLFIRTLLRRPERAELENF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPEKGVLPMHCSANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSSENEPEIYAASTRFGAVLENVVLGELDRKPDFDDGSKTENTRSAYPLESI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_AZOC5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 92/208 (44.23%), Postives = 130/208 (62.50%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            R+ +  A+HSLF+  M  RP  EEL  +  P+ TI +   F  +   H + S T I +N  R+ ++I  + YAGEMKK +F+ ++YL+P + ++ +H   N GKDGDVA               D  R L+GDDEH WS+ GV N EGGCYAK I LS+E EP+I+ A  +FGT+LEN++  E TR  D+ D S+TENTR+AYP+++I
Sbjct:  125 RVYTEYAWHSLFIRTMLRRPAREELPGY-VPELTIIDLPSFKADPARHGVRSDTIIAVNFTRRIVLIGSSSYAGEMKKSVFTFLNYLLPAKGVMPMHCSANAGKDGDVALFFGLSGTGKTTLSADPARTLLGDDEHGWSNTGVFNFEGGCYAKTIRLSKEAEPEIFAASDRFGTILENVILHEDTRVPDFDDGSLTENTRSAYPLDFI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisB18) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.257e-45
Identity = 95/210 (45.24%), Postives = 126/210 (60.00%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP + EL  F  P+ TI +   F  +   H   S   + I+  RK ++I GTQYAGEMKK +F+ ++Y +P + +L +H   N+G DGD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG +LEN V D  TR+ D+ D S TENTR+AYP+E I
Sbjct:  123 KTRVFTEMAWHSLFIRTLLRRPETAELASF-VPELTIIDLASFRADPARHGCKSENVVAIDFTRKIVLIGGTQYAGEMKKSVFTTLNYYLPDKGVLPMHCSANVGPDGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAEAEPEIFAASNRFGAILENCVLDPITRKPDFNDGSKTENTRSAYPLESI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain HaA2) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.257e-45
Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP    LE F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P++ ++ +H   N+G  GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V DE TR+ D+ D S TENTR+AYP+E I
Sbjct:  123 KTRVFTELAWHSLFIRTLLRRPDRAALESF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPEKGVMPMHCSANVGPQGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSPEAEPEIFAASSRFGAVLENVVLDEITRKPDFDDGSKTENTRSAYPLESI 331          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_PSEAB4.255e-4542.79Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PSEA84.255e-4542.79Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PORGI4.255e-4545.50Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyr... [more]
PCKA_PORG34.255e-4545.50Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyr... [more]
PCKA_SHELP5.557e-4543.27Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_RHOPT5.557e-4545.24Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOPA5.557e-4545.24Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_AZOC55.557e-4544.23Phosphoenolpyruvate carboxykinase [ATP] OS=Azorhiz... [more]
PCKA_RHOPB7.257e-4545.24Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOP27.257e-4545.24Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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