FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.257e-45
Identity = 94/209 (44.98%), Postives = 129/209 (61.72%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +RI++ RA+H+LF  NM +R T EEL    T +FT+ +   F          S   I IN ARK ++I GT YAGE+KK +F++++YL+P++ ++S+H   N G+ G+VA                 NR LIGDDEH W D GV N EGGCYAK I+LS + EP+I+    KFGT+LEN+  D  +R +D  D S TENTRA+YPI +I
Sbjct:  124 VRIITERAWHALFARNMFLRATQEELLTHNT-EFTVIDLPAFHAQPKVDGTNSEAFIIINFARKLVIIGGTSYAGEIKKSIFTVLNYLLPQKGVMSMHCSANAGEKGEVAIFFGLSGTGKTTLSAAPNRLLIGDDEHGWDDAGVFNFEGGCYAKVINLSPQSEPEIYQCTRKFGTILENVAIDTISRRIDLDDASFTENTRASYPITHI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 7.257e-45
Identity = 92/210 (43.81%), Postives = 126/210 (60.00%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGK-DGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            + R+++  A  +LF+H + IR T EE  +    DFTI +A  F C      + S  +I IN  +K  +I  T+Y+GE+KK +FS+M+Y+MP   IL +H   NM     + A               D NR LIGDDEH W D G+ N EGGCYAKCI+L  E EP+I+ AIKFG+++EN+V D  TR++ Y D S+T NTR  YPI+YI
Sbjct:  114 RFRVINELASQNLFIHQLLIR-TDEEYNENNDIDFTIISAPNFHCVPEIDGVNSEAAIIINFEKKIAIICATKYSGEIKKSVFSIMNYIMPHENILPMHCSANMDPVTHETAIFFGLSGTGKTTLSADPNRKLIGDDEHGWCDKGIFNFEGGCYAKCINLKEESEPEIYRAIKFGSLVENVVVDPITRKIQYEDASITPNTRVGYPIDYI 322          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ANASU (Phosphoenolpyruvate carboxykinase [ATP] OS=Anaerobiospirillum succiniciproducens GN=pckA PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.257e-45
Identity = 97/211 (45.97%), Postives = 129/211 (61.14%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R V   A+ + F+ NM IRPT EEL+ F  PDF + NA +     +    + S T++  NLA K  +IL T Y GEMKKG+FS+M++ +P + I ++H   N   +G + A               D  R LIGDDEH W D+GV N EGGCYAK I+LS+E EPDIW AIK   +LEN+  D + + VD+ DKSVTENTR +YPI +I
Sbjct:  127 KIRFVMEVAWQAHFVTNMFIRPTEEELKGF-EPDFVVLNASKAKVENFKELGLNSETAVVFNLAEKMQIILNTWYGGEMKKGMFSMMNFYLPLQGIAAMHCSANTDLEGKNTAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDDGVFNFEGGCYAKVINLSKENEPDIWGAIKRNALLENVTVDANGK-VDFADKSVTENTRVSYPIFHI 335          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_COXB2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiella burnetii (strain CbuG_Q212) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.479e-45
Identity = 89/208 (42.79%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            L++V+  A+H+LF  ++ IRP+ +     G P + I +A     +     + S  ++ INL+++ ++++G  YAGE+KK +FS+++YL+P   +L +H   N G+ GDVA               D +R+LIGDDEH WS   V N EGGCYAKCIDLS+E+EP IWNAI+ G ++EN+V DE+    DY D  +T+N+RAAYP EYI
Sbjct:  110 LKVVTEFAWHNLFACDLFIRPSGDHAN--GKPSWVILSAPGLKTDPERDGVNSDGAVMINLSQRRVLLVGMPYAGEIKKAMFSVLNYLLPPHDVLPMHCAANAGQSGDVALFFGLSGTGKTTLSADPHRFLIGDDEHGWSATSVFNFEGGCYAKCIDLSQEREPMIWNAIRHGAIMENVVLDEN-GVPDYADARLTQNSRAAYPREYI 314          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_AZOPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.479e-45
Identity = 94/211 (44.55%), Postives = 128/211 (60.66%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLD-KSVTENTRAAYPIEYI 627
            K+R +   A+ + F+ NM IRP++ EL+ +G PDF ++N  +    ++    + S   I  NL  KE +I GT Y GEMKKG+FS+ +Y +P + I S+H   N+G+ GDVA               D  RYLIGDDEH W DNG+ N EGGCYAK IDLS++ EPDIWNAI+   +LEN+   +    +DY    S TENTR +YPI +I
Sbjct:  124 KVRFIVEVAWQAHFVTNMFIRPSNYELDHYGDPDFVVFNGSKTTNPKWKEQGLNSEIYILFNLTEKEQIIGGTWYGGEMKKGMFSMQNYYLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSADPKRYLIGDDEHGWDDNGIFNYEGGCYAKVIDLSQKNEPDIWNAIRRDALLENVTV-KADGTLDYSKVASKTENTRVSYPIHHI 333          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PSESM (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas syringae pv. tomato GN=pckA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.238e-44
Identity = 91/208 (43.75%), Postives = 126/208 (60.58%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++ +  A+H+LF   + I P  E+    G  ++ I NA  F C+       S  ++ IN A ++++I G +YAGEMKK +FS+ ++L+P   +L +H   NMG++GDV                D +RYLIGDDEH W    V NIEGGCYAKCIDLS + EP IW AI+ G VLEN+V D  T+  DY D S+T+N+RAAYP E I
Sbjct:  109 VKMTTETAWHNLFGRCLFINP--EQYNPAGKDEWEIQNAPWFVCDPERDGTNSDGTVIINFAARKVLIAGMRYAGEMKKAMFSVQNFLLPAVDVLPMHCAANMGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGVGVVFNIEGGCYAKCIDLSEKNEPVIWKAIQHGAVLENVVLDPVTKTADYADSSLTQNSRAAYPRELI 314          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_GEOUR (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter uraniireducens (strain Rf4) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.238e-44
Identity = 93/210 (44.29%), Postives = 132/210 (62.86%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKR-QILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++ +A+HSLF  NM ++ T+ ELE+   P FT+ +   F          S T I IN A++ ++I GT YAGE+KK +F++++YL+P   +++S+H   N G+ GDVA                 NR LIGDDEH W D+GV N EGGCYAK I+LS+E EP+I+    KFGT+LEN+  D  +R +D  D S TENTRA+YPI +I
Sbjct:  124 IRVIAEKAWHSLFARNMFVKATAAELENH-KPRFTVIDMPNFHAVPQIDGTNSETFIIINFAKRLVIIGGTSYAGEIKKSIFTVLNYLLPHHSKVMSMHCSANTGEKGDVAVFFGLSGTGKTTLSAAPNRSLIGDDEHGWDDDGVFNFEGGCYAKIINLSKESEPEIYETTRKFGTILENVAIDTISRRIDLNDDSFTENTRASYPITHI 332          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_COXBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiella burnetii (strain Dugway 5J108-111) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.238e-44
Identity = 89/208 (42.79%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            L++V+  A+H+LF  ++ IRP+ +     G P + I +A     +     + S  ++ INL+++ ++++G  YAGEMKK +FS+++YL+P   +L +H   N G+ GDVA               D +R+LIGDDEH WS   V N EGGCYAKCIDLS+E+EP IWNAI+ G ++EN+V DE+    DY D  +T+N+RAAYP E+I
Sbjct:  110 LKVVTEFAWHNLFACDLFIRPSGDHAN--GKPSWVILSAPGLKTDPERDGVNSDGAVMINLSQRRVLLVGMPYAGEMKKAMFSVLNYLLPPHDVLPMHCAANAGQSGDVALFFGLSGTGKTTLSADPHRFLIGDDEHGWSATSVFNFEGGCYAKCIDLSQEREPMIWNAIRHGAIMENVVLDEN-GVPDYADARLTQNSRAAYPREHI 314          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_NITWN (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.617e-44
Identity = 93/210 (44.29%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP + EL  F  P+ T+ +   F  +   H + S   + I+  R+ ++I G+ YAGEMKK +F+ ++Y +P + +L +H   N+G  GD A               D  R LIGDDEH WS +G+ N EGGCYAKCI LSRE EP+I+ A K FG VLEN+V DE TR  D+ D S TENTR+AYP+E+I
Sbjct:  123 KTRVFTELAWHSLFIRTLLRRPETSELAAF-VPELTVIDLPSFRADPQRHGVRSENVVAIDFTRRIILIGGSHYAGEMKKSIFTTLNYYLPDQDVLPMHCSANVGPGGDSAIFFGLSGTGKTTLSADPGRTLIGDDEHGWSKDGIFNFEGGCYAKCIRLSREAEPEIYAASKRFGAVLENVVHDEVTRVPDFNDGSKTENTRSAYPLEFI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_COXB1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiella burnetii (strain CbuK_Q154) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.112e-44
Identity = 89/208 (42.79%), Postives = 131/208 (62.98%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            L++V+  A+H+LF  ++ IRP+ +     G P + I +A     +     + S  ++ INL+++ ++ +G  YAGEMKK +FS+++YL+P   +L +H   N G+ GDVA               D +R+LIGDDEH WS   V N EGGCYAKCIDLS+E+EP IWNAI+ G ++EN+V DE+    DY D  +T+N+RAAYP E+I
Sbjct:  110 LKVVTEFAWHNLFACDLFIRPSGDHAN--GKPSWVILSAPGLKTDPERDGVNSDGAVMINLSQRRVLFVGMPYAGEMKKAMFSVLNYLLPPHDVLPMHCAANAGQSGDVALFFGLSGTGKTTLSADPHRFLIGDDEHGWSATSVFNFEGGCYAKCIDLSQEREPMIWNAIRHGAIMENVVLDEN-GVPDYADARLTQNSRAAYPREHI 314          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_GEOSM7.257e-4544.98Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_FUSNN7.257e-4543.81Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_ANASU7.257e-4545.97Phosphoenolpyruvate carboxykinase [ATP] OS=Anaerob... [more]
PCKA_COXB29.479e-4542.79Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiell... [more]
PCKA_AZOPC9.479e-4544.55Phosphoenolpyruvate carboxykinase [ATP] OS=Azobact... [more]
PCKA_PSESM1.238e-4443.75Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_GEOUR1.238e-4444.29Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_COXBN1.238e-4442.79Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiell... [more]
PCKA_NITWN1.617e-4444.29Phosphoenolpyruvate carboxykinase [ATP] OS=Nitroba... [more]
PCKA_COXB12.112e-4442.79Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiell... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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