FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PARL1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.758e-44
Identity = 91/208 (43.75%), Postives = 130/208 (62.50%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            RI +  A+HSLF+ N+ I P  EEL  F  P FTI +   F  +   + + + T I  N A++ ++I GT YAGE+KK +FS+++Y +P ++++ +H   N+G++GD A                  R LIGDDEH WS+NGV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+TRE+D    ++ EN+R AYP+ +I
Sbjct:  125 RIYTEYAWHSLFIQNLLIEPKPEELGSFD-PQFTIIDLPSFEADPEKYGVRTGTVIACNFAKRIVLIAGTSYAGEIKKSVFSMLNYELPPKRVMPMHCSANVGEEGDTAIFFGLSGTGKTTLSAVATRTLIGDDEHGWSENGVFNFEGGCYAKMIKLSAEAEPEIYAVTRRFGTVLENVVMDENTRELDLDSAALAENSRGAYPLSFI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_MARAV (Phosphoenolpyruvate carboxykinase [ATP] OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.758e-44
Identity = 85/208 (40.87%), Postives = 129/208 (62.02%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++ +  A+ +LF  N+ IRP S    D    ++ I NA  F C        S+  + IN A++++++ G  YAGEMKK +FS+ ++L+P++ +L +H   N+ + G+                 D +R+LIGDDEH W    V NIEGGCYAKCIDLS++ EP IW+AI+FG ++EN++ D  TRE DY D S+TEN+R AYP+E++
Sbjct:  105 VKMTTETAWQNLFGRNLFIRPDSFNPAD--KQEWQILNAANFECVPERDGTNSNGCVIINFAKRKVLLAGMHYAGEMKKAMFSVQNFLLPEKDVLPMHCSANVSETGETCLFFGLSGTGKTTLSADPHRFLIGDDEHGWGPGTVFNIEGGCYAKCIDLSQKNEPIIWDAIRFGAIVENVMIDPETREPDYNDVSLTENSRCAYPLEHV 310          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_EUBR3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.758e-44
Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGD-VAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R +   A+ + F+ NM I+P++EELE+F  PDF +YNA +     Y    + S T +  N+  KE VI+ T Y GEMKKG+FS+M+Y +P + I S+H   N   +G+  A               D  R LIGDDEH W DNGV N EGGCYAK I L +E EPDI+NAI+   +LEN+   +  + +D+ DKSVTENTR +YPI +I
Sbjct:  128 VRFIVEVAWQAHFVTNMFIQPSAEELENF-EPDFVVYNASKAKVENYKELGLNSETCVAFNITSKEQVIINTWYGGEMKKGMFSMMNYYLPLKGIASMHCSANADMNGENTAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDNGVFNFEGGCYAKVIGLDKESEPDIYNAIRRDALLENVTVADDGK-IDFEDKSVTENTRVSYPINHI 335          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA1_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salinibacter ruber (strain DSM 13855) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.758e-44
Identity = 86/209 (41.15%), Postives = 130/209 (62.20%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +RI++ +A+HSLF  NM +RP     + F  P FT+ +  +F  +       S  ++ +++A+  ++I GT Y GE+KK +FS+++Y++P+  +L +H   N G+DGD A               D +R LIGDDEH WSD GV N EGGCYAK ID++ E EP+I     +FGT+LEN++ D  TRE D+ D ++T+NTR +YP+ YI
Sbjct:  122 VRIITEKAWHSLFARNMFVRPDGPVPDSF-EPGFTVVDLCEFEADPERDGTHSEAAVFVDIAQNLILIGGTHYGGEIKKSIFSVLNYMLPEEGVLPMHCSANEGEDGDTAVFFGLSGTGKTTLSADASRTLIGDDEHGWSDRGVYNFEGGCYAKMIDITPESEPEIHGTTEEFGTILENVIVDPDTREPDFSDDTITQNTRGSYPLHYI 329          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisA53) GN=pckA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.602e-44
Identity = 94/210 (44.76%), Postives = 125/210 (59.52%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP +  L  F  P+ TI +   F  +   H   S   + I+  RK ++I GTQYAGEMKK +F+ ++Y +P + +L +H   N+G DGD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG +LEN V D  TR+ D+ D S TENTR+AYP+E I
Sbjct:  123 KTRVFTEMAWHSLFIRTLLRRPETAALASF-VPELTIIDLASFRADPKRHGCQSENVVAIDFTRKIVLIGGTQYAGEMKKSVFTTLNYYLPDKGVLPMHCSANVGPDGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAEAEPEIFAASNRFGAILENTVLDPITRKPDFNDGSKTENTRSAYPLESI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisB5) GN=pckA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.704e-44
Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  +  RP   +L  F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P+R +L +H   N+G  GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V DE TR+ D+ + S TENTR+AYP+E I
Sbjct:  123 KTRVFTELAWHSLFIRTLLRRPDRADLAAF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPERGVLPMHCSANVGPAGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSPEAEPEIFAASSRFGAVLENVVLDEITRKPDFDNGSKTENTRSAYPLESI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PARDP (Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoccus denitrificans (strain Pd 1222) GN=pckA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.704e-44
Identity = 92/211 (43.60%), Postives = 130/211 (61.61%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V+  A+H LF+ N+  RP + EL  F  P+FTI N   F  +   H   S T I +N  +K ++I  T YAGE KK +F+L++Y++P++ ++ +H   N  +G   D A               D +R LIGDDEH WSDNG+ N EGGCYAK I+LS E EP+I+    KFGTV+EN+V+D  T E+D+ D S+T+N R AYP+E I
Sbjct:  123 VRVVTELAWHGLFIRNLLRRPEASELAGF-LPEFTIINCPSFKADPARHGCRSETVIALNFDKKLILIGNTAYAGENKKSVFTLLNYILPEKGVMPMHCSANHALGNPNDSAIFFGLSGTGKTTLSADPSRTLIGDDEHGWSDNGIFNFEGGCYAKTINLSAEAEPEIYATCFKFGTVIENMVYDPDTLELDFEDNSLTDNMRCAYPLEQI 332          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACFR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis GN=pckA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.704e-44
Identity = 96/211 (45.50%), Postives = 127/211 (60.19%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R +   A+ + F+ NM IRPT+EEL ++G PDF  +NA +   + Y    + S T+   NL  KE VIL T Y GEMKKG+FS+M+Y+ P R I S+H   N   +G   A               D  R LIGDDEH W + GV N EGGCYAK I+L +E EPDI+NAIK   +LEN+      + +++ DKSVTENTR +YPI +I
Sbjct:  127 KVRFIMEVAWQAHFVTNMFIRPTAEELANYGEPDFVCFNASKAKVDNYKELGLNSETATVFNLKTKEQVILNTWYGGEMKKGMFSIMNYMNPLRGIASMHCSANTDMEGTSSAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDNEGVFNYEGGCYAKVINLDKESEPDIFNAIKRDALLENVTVAADGK-INFADKSVTENTRVSYPIYHI 336          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACFN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=pckA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.704e-44
Identity = 96/211 (45.50%), Postives = 127/211 (60.19%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R +   A+ + F+ NM IRPT+EEL ++G PDF  +NA +   + Y    + S T+   NL  KE VIL T Y GEMKKG+FS+M+Y+ P R I S+H   N   +G   A               D  R LIGDDEH W + GV N EGGCYAK I+L +E EPDI+NAIK   +LEN+      + +++ DKSVTENTR +YPI +I
Sbjct:  127 KVRFIMEVAWQAHFVTNMFIRPTAEELANYGEPDFVCFNASKAKVDNYKELGLNSETATVFNLKTKEQVILNTWYGGEMKKGMFSIMNYMNPLRGIASMHCSANTDMEGTSSAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDNEGVFNYEGGCYAKVINLDKESEPDIFNAIKRDALLENVTVAADGK-INFADKSVTENTRVSYPIYHI 336          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ALISL (Phosphoenolpyruvate carboxykinase [ATP] OS=Aliivibrio salmonicida (strain LFI1238) GN=pckA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.704e-44
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRY-THYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++  A+ + F+ NM IRPT EELE F  PDF + N  +     Y    + S   +  NL  +  +I GT Y GEMKKG+F++M+YL+P + I S+H   N+GK+GDVA               D  R LIGDDEH W D+G+ N EGGCYAK I LS+E EPDI+NAI+   +LEN+    +   +D+ D S TENTR +YPI +I
Sbjct:  135 VRVITEVAWQAHFVKNMFIRPTDEELESF-EPDFVVMNGAKATNPNYEAQGLNSENFVAFNLTERVQIIGGTWYGGEMKKGMFAMMNYLLPLKGIASMHCSANVGKEGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGIFNFEGGCYAKTIRLSKEAEPDIFNAIRRDALLENVTV-RNDGSIDFDDGSKTENTRVSYPIYHI 341          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_PARL12.758e-4443.75Phosphoenolpyruvate carboxykinase [ATP] OS=Parviba... [more]
PCKA_MARAV2.758e-4440.87Phosphoenolpyruvate carboxykinase [ATP] OS=Marinob... [more]
PCKA_EUBR32.758e-4444.76Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA1_SALRD2.758e-4441.15Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salin... [more]
PCKA_RHOP53.602e-4444.76Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOPS4.704e-4445.24Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_PARDP4.704e-4443.60Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoc... [more]
PCKA_BACFR4.704e-4445.50Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_BACFN4.704e-4445.50Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_ALISL4.704e-4444.50Phosphoenolpyruvate carboxykinase [ATP] OS=Aliivib... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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