FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_VIBF1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pckA PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 6.144e-44
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +RI++  A+ + F+ NM IRPT  ELE+F  PDF + N  +     Y  H + S   +  NL  +  +I GT Y GEMKKG+F++M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+G+ N EGGCYAK I LS+E EPDI+NAI+   +LEN+     +  +D+ D S TENTR +YPI +I
Sbjct:  132 VRIITEVAWQAHFVKNMFIRPTEAELENF-EPDFVVMNGAKVTNPNYEKHGLNSENFVAFNLTERVQIIGGTWYGGEMKKGMFAMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGIFNFEGGCYAKTIRLSKEAEPDIYNAIRRDALLENVTVRSDS-SIDFNDGSKTENTRVSYPIYHI 338          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SILPO (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter pomeroyi GN=pckA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.144e-44
Identity = 92/211 (43.60%), Postives = 131/211 (62.09%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V+  A+H+LF+ ++  RP  E+L +F   DFT+ N   F  +   H   S T I +N  RK ++I GT+YAGE KK +F+L++Y++P++ ++ +H   N  +G   D A               D  R LIGDDEH WSD G  N EGGCYAK I+L+ E EP+I+    KF TV+EN+VFDE T+E+D+ D S+T N R AYP+EYI
Sbjct:  123 VRMVTELAWHNLFIRHLLRRPAREDLNEF-VADFTVINCPSFQADPAKHGCRSETVIAMNFDRKLILIGGTEYAGENKKSVFTLLNYMLPEKGVMPMHCSANHAVGNPVDTAVFFGLSGTGKTTLSADPARVLIGDDEHGWSDRGTFNFEGGCYAKTINLNPEAEPEIYATTTKFATVIENMVFDEETKELDFDDDSLTANMRCAYPLEYI 332          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_IDILO (Phosphoenolpyruvate carboxykinase [ATP] OS=Idiomarina loihiensis GN=pckA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.144e-44
Identity = 94/209 (44.98%), Postives = 130/209 (62.20%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRP+ EELE+F  PDF + N  +    ++    + S   +  NL  K  +I GT Y GEMKKG+FS+M+Y +P + I S+H   N+G++GDVA               D  R LIGDDEH W D+GV N EGGCYAK I+LS+E EPDI+NAI+   +LEN+  D++   VD+ D S TENTR +YPI +I
Sbjct:  127 VRFITEVAWQAHFVKNMFIRPSEEELENF-EPDFVVMNGAKCINPKWQEQELNSENFVAFNLTEKIQLIGGTWYGGEMKKGMFSMMNYFLPLKGIASMHCSANVGQEGDVAVFFGLSGTGKTTLSTDPKRALIGDDEHGWDDDGVFNFEGGCYAKTINLSKEAEPDIYNAIRRDALLENVAVDDN-GVVDFDDNSKTENTRVSYPIYHI 333          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_VIBFM (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio fischeri (strain MJ11) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.024e-44
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +RI++  A+ + F+ NM IRPT  ELE+F  PDF + N  +     Y  H + S   +  NL  +  +I GT Y GEMKKG+F++M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+G+ N EGGCYAK I LS+E EPDI+NAI+   +LEN+     +  +D+ D S TENTR +YPI +I
Sbjct:  135 VRIITEVAWQAHFVKNMFIRPTEAELENF-EPDFVVMNGAKATNPNYEKHGLNSENFVAFNLTERVQIIGGTWYGGEMKKGMFAMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGIFNFEGGCYAKTIRLSKEAEPDIYNAIRRDALLENVTVRSDS-SIDFNDGSKTENTRVSYPIYHI 341          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.024e-44
Identity = 94/208 (45.19%), Postives = 129/208 (62.02%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            R+V+  A+HSLF+ N+ IRP +  L  F  P  TI +   F  +   H   S T I  +L    ++I GT YAGEMKK +F++++YL+P + ++ +H   N+G DGD A               D  R LIGDDEH WS+NG+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V +E +RE D+ D S+TENTR AYP+++I
Sbjct:  125 RVVTEFAWHSLFIRNLLIRPDTAALSSF-VPKLTIIDLPSFKADPARHGCRSETVIACDLTNGLVLIGGTSYAGEMKKSVFTVLNYLLPAKGVMPMHCSANVGPDGDAAVFFGLSGTGKTTLSADPARTLIGDDEHGWSENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNE-SREPDFNDGSLTENTRCAYPMDFI 330          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SELRU (Phosphoenolpyruvate carboxykinase [ATP] OS=Selenomonas ruminantium GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 92/210 (43.81%), Postives = 126/210 (60.00%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R +   A+ + F+ NM I+PT EEL +F  PDF +YNA +     Y    + S T++  NL  +E VI+ T Y GEMKKG+FS+M+Y +P + I ++H   N  K G + A               D  R LIGDDEH W D GV N EGGCYAK I+L  E EPDI+ AIK   +LEN+  D+    +D+ DK++TENTR +YPI++I
Sbjct:  128 VRFIVEVAWQAHFVTNMFIQPTEEELANF-KPDFVVYNASKAKVENYKELGLHSETAVVFNLTSREQVIINTWYGGEMKKGMFSMMNYFLPLKGIAAMHCSANTDKQGQNTAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDEGVFNFEGGCYAKVINLDMESEPDIYGAIKRNALLENVTLDD-KGNIDFADKTITENTRVSYPIDHI 335          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 91/211 (43.13%), Postives = 130/211 (61.61%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V+  A+H LF+ +M  RP   EL+ F  PD+T+ N   F  +   H   + T I +N  RK ++I  T+YAGE KK +F+L++Y++P + ++++H   N  +G   D A               D +R LIGDDEH WSD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V+DE T E+D+ D S+T NTR AYP++YI
Sbjct:  123 VRMVTELAWHGLFIRHMLRRPERAELDSF-VPDWTVINCPSFKADPERHGCRTDTVIVLNFERKLILIANTEYAGENKKSVFTLLNYILPGKGVMAMHCSANHALGDTDDAAVFFGLSGTGKTTLSADPSRTLIGDDEHGWSDRGTFNFEGGCYAKTINLSAEAEPEIYATTSKFATVVENMVYDEETLELDFNDDSLTANTRCAYPLDYI 332          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 91/211 (43.13%), Postives = 130/211 (61.61%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V+  A+H LF+ +M  RP   EL+ F  PD+T+ N   F  +   H   + T I +N  RK ++I  T+YAGE KK +F+L++Y++P + ++++H   N  +G   D A               D +R LIGDDEH WSD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V+DE T E+D+ D S+T NTR AYP++YI
Sbjct:  123 VRMVTELAWHGLFIRHMLRRPERAELDSF-VPDWTVINCPSFKADPERHGCRTDTVIVLNFERKLILIANTEYAGENKKSVFTLLNYILPGKGVMAMHCSANHALGDTDDAAVFFGLSGTGKTTLSADPSRTLIGDDEHGWSDRGTFNFEGGCYAKTINLSAEAEPEIYATTSKFATVVENMVYDEETLELDFNDDSLTANTRCAYPLDYI 332          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_OLICO (Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 93/210 (44.29%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+  M  RP +  L DF  P+ TI +   F  +   H + S T + I+  RK ++I GT YAGEMKK +F+ +++ +P++ +L +H   N+G  GD A               D  R L+GDDEH W  +GV N EGGCYAK I LSRE EP I++A ++FG VLEN+V D  TR VD+ D S TENTR+AYP++ I
Sbjct:  123 KTRVYTELAWHSLFIRTMLRRPETAALADF-VPELTIIDLPSFRADPARHGVRSPTVVAIDFTRKIVLIGGTHYAGEMKKSVFTTLNFYLPEQGVLPMHCSANVGAKGDAAVFFGLSGTGKTTLSADPQRTLLGDDEHGWGPDGVFNFEGGCYAKTIRLSREAEPAIYDASLRFGAVLENVVVDSQTRAVDFDDGSKTENTRSAYPLDAI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_HAEPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 97/209 (46.41%), Postives = 126/209 (60.29%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +RIV+  A+ + F+ NM IRP+  EL +F TPDF + N  +     +    + S   +  N+  K  +I GT Y GEMKKGLFSLM+Y +P + I S+H   N+G+DGDVA               D  R LIGDDEH W D+GV N EGGCYAK I+LS E EPDI+ AIK   +LEN+V  E    +D+ D S TENTR +YPI +I
Sbjct:  131 VRIVTEVAWQAHFVKNMFIRPSEAELANF-TPDFVVMNGSKVTNPNWKEQGLNSENFVAFNITEKIQLIGGTWYGGEMKKGLFSLMNYWLPLKGIASMHCSANVGEDGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNYEGGCYAKTINLSEENEPDIYRAIKRDALLENVVVRE-DGSIDFADGSKTENTRVSYPIYHI 337          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_VIBF16.144e-4444.50Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_SILPO6.144e-4443.60Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_IDILO6.144e-4444.98Phosphoenolpyruvate carboxykinase [ATP] OS=Idiomar... [more]
PCKA_VIBFM8.024e-4444.50Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_RHIL38.024e-4445.19Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_SELRU1.048e-4343.81Phosphoenolpyruvate carboxykinase [ATP] OS=Selenom... [more]
PCKA_RHOS41.048e-4343.13Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_RHOS11.048e-4343.13Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_OLICO1.048e-4344.29Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotr... [more]
PCKA_HAEPS1.048e-4346.41Phosphoenolpyruvate carboxykinase [ATP] OS=Haemoph... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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