FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BRUSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella suis GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 90/208 (43.27%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            R+++  A+HSLF+ N+ IRP+ E L  +  P+ TI +   F  +   + + + T I ++L RK ++I GT YAGEMKK +F+ ++Y++P + ++ +H   N G +GD A               D  R LIGDDEH W ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++I
Sbjct:  125 RVITEYAWHSLFIRNLLIRPSQEALASY-VPEMTIIDLPSFKADPERYGVRTETVIAVDLTRKIVLIGGTSYAGEMKKSVFTALNYILPAKGVMPMHCSANEGPNGDTAVFFGLSGTGKTTLSADPTRTLIGDDEHGWGEHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFI 330          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BRUME (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella melitensis GN=pckA PE=3 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 90/208 (43.27%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            R+++  A+HSLF+ N+ IRP+ E L  +  P+ TI +   F  +   + + + T I ++L RK ++I GT YAGEMKK +F+ ++Y++P + ++ +H   N G +GD A               D  R LIGDDEH W ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++I
Sbjct:  125 RVITEYAWHSLFIRNLLIRPSQEALASY-VPEMTIIDLPSFKADPERYGVRTETVIAVDLTRKIVLIGGTSYAGEMKKSVFTALNYILPAKGVMPMHCSANEGPNGDTAVFFGLSGTGKTTLSADPTRTLIGDDEHGWGEHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFI 330          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BRUC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 90/208 (43.27%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            R+++  A+HSLF+ N+ IRP+ E L  +  P+ TI +   F  +   + + + T I ++L RK ++I GT YAGEMKK +F+ ++Y++P + ++ +H   N G +GD A               D  R LIGDDEH W ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++I
Sbjct:  125 RVITEYAWHSLFIRNLLIRPSQEALASY-VPEMTIIDLPSFKADPERYGVRTETVIAVDLTRKIVLIGGTSYAGEMKKSVFTALNYILPAKGVMPMHCSANEGPNGDTAVFFGLSGTGKTTLSADPTRTLIGDDEHGWGEHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFI 330          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_NITHX (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=pckA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.369e-43
Identity = 91/208 (43.75%), Postives = 125/208 (60.10%), Query Frame = 1
Query:    7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            R+ +  A+HSLF+  +  RP + EL  F  P+ T+ +   F  +   H + S   + I+  RK ++I G+ YAGEMKK +F+ ++Y +P   +L +H   N+G +GD                 D  R LIGDDEH WS  G+ N EGGCYAKCI LS+E EP+I+ A K FG VLEN+V DE TR  D+ D S TENTR+AYP+E+I
Sbjct:  125 RVFTELAWHSLFIRTLLRRPDTSELAGF-VPELTVIDLPSFRADPERHGVRSENVVAIDFVRKIILIGGSHYAGEMKKSIFTTLNYYLPDNGVLPMHCSANVGPEGDSTIFFGLSGTGKTTLSADPKRTLIGDDEHGWSKEGIFNFEGGCYAKCIKLSQEAEPEIYAASKRFGAVLENVVHDESTRVPDFDDGSKTENTRSAYPLEFI 331          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_VIBPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio parahaemolyticus GN=pckA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.788e-43
Identity = 93/209 (44.50%), Postives = 126/209 (60.29%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDI-NLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++     +S +  + NL  +  +I GT Y GEMKKG+F++M+Y +P + I S+H   NMGKDGDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I
Sbjct:  136 IRVITEVAWQAHFVKNMFIRPTEEELATF-EPDFVVMNGAKCTNPKWEEQGLNSENFTVFNLTERTQLIGGTWYGGEMKKGMFAMMNYFLPLKDIASMHCSANMGKDGDVAVFFGLSGTGKTTLSTDPKRALIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHI 342          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PSEP1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pckA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.788e-43
Identity = 87/208 (41.83%), Postives = 125/208 (60.10%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++ +  A+ +LF   + I P  E+    G   + I N   F C        S   + IN A+K+++I G +YAGEMKK +FS+ ++L+P   +L +H   N+G++GDV                D +RYLIGDDEH W +  V N+EGGCYAKCIDLS + EP IW AIK G VLEN+V D + +  DY D S+T+N+RAAYP+E++
Sbjct:  109 VKMTTQTAWQNLFGRCLFINP--EQFNPAGRDQWQILNVANFVCEPERDGTNSDGCVIINFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPAADVLPMHCAANIGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNMEGGCYAKCIDLSEKNEPVIWKAIKHGAVLENVVLDAN-KHADYTDVSLTQNSRAAYPLEHV 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PHOPR (Phosphoenolpyruvate carboxykinase [ATP] OS=Photobacterium profundum GN=pckA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.788e-43
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDI-NLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++     +S +  + NL  K  +I GT Y GEMKKG+F++M+Y +P + I S+H   NMG++GDVA               D  R LIGDDEH W DNGV N EGGCYAK I+LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I
Sbjct:  124 IRVITEVAWQAHFVKNMFIRPTEEELASF-KPDFVVMNGAKCTNEKWEEQGLNSENFTVFNLTEKMQLIGGTWYGGEMKKGMFAMMNYFLPLQGIASMHCSANMGENGDVAVFFGLSGTGKTTLSTDPKRALIGDDEHGWDDNGVFNFEGGCYAKTINLSKEAEPDIYNAIRRDALLENVTV-RADGAIDFDDNSKTENTRVSYPIYHI 330          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_VIBVY (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio vulnificus (strain YJ016) GN=pckA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.335e-43
Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDI-NLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++  +  +S +  + NL  +  +I GT Y GEMKKG+F++M+Y +P + I S+H   NMGK+GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+    +   +++ D S TENTR +YPI +I
Sbjct:  136 IRVITEVAWQAHFVKNMFIRPTEEELASF-EPDFVVMNGAKCTNQKWKEHGLNSENFTVFNLTERMQLIGGTWYGGEMKKGMFAMMNYFLPLKGIASMHCSANMGKEGDVAIFFGLSGTGKTTLSTDPKRALIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRNALLENVTV-RNDGSINFDDGSKTENTRVSYPIHHI 342          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PSEPG (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas putida (strain GB-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.335e-43
Identity = 86/208 (41.35%), Postives = 125/208 (60.10%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++ +  A+ +LF   + I P  E+    G   + + N   F C        S   + IN A+K+++I G +YAGEMKK +FS+ ++L+P   +L +H   N+G++GDV                D +RYLIGDDEH W +  V N+EGGCYAKCIDLS + EP IW AIK G VLEN+V D + +  DY D S+T+N+RAAYP+E++
Sbjct:  109 VKMTTQTAWQNLFGRCLFINP--EQFNPAGRDQWQVLNVANFVCEPERDGTNSDGCVIINFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPAADVLPMHCAANIGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNMEGGCYAKCIDLSEKNEPVIWKAIKHGAVLENVVLDAN-KHADYTDVSLTQNSRAAYPLEHV 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PHOLL (Phosphoenolpyruvate carboxykinase [ATP] OS=Photorhabdus luminescens subsp. laumondii GN=pckA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.335e-43
Identity = 96/211 (45.50%), Postives = 130/211 (61.61%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENI-VFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R ++  A+ + F+ NM IRP+ EEL +F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I+LS+E EPDI+NAIK   +LEN+ V  + T  VD+ D S TENTR +YPI +I
Sbjct:  133 KVRFITEVAWQAHFVKNMFIRPSDEELAEF-KPDFIVMNGAKCTNPQWQEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTINLSKEAEPDIYNAIKRDALLENVTVLTDGT--VDFRDGSKTENTRVSYPINHI 340          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BRUSU1.048e-4343.27Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_BRUME1.048e-4343.27Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_BRUC21.048e-4343.27Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_NITHX1.369e-4343.75Phosphoenolpyruvate carboxykinase [ATP] OS=Nitroba... [more]
PCKA_VIBPA1.788e-4344.50Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_PSEP11.788e-4341.83Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PHOPR1.788e-4344.50Phosphoenolpyruvate carboxykinase [ATP] OS=Photoba... [more]
PCKA_VIBVY2.335e-4343.54Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_PSEPG2.335e-4341.35Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PHOLL2.335e-4345.50Phosphoenolpyruvate carboxykinase [ATP] OS=Photorh... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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