FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACWK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus weihenstephanensis (strain KBAB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.241e-53
Identity = 103/208 (49.52%), Postives = 142/208 (68.27%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++V+  A+H+LF+H + IRP  EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AIKFG+VLEN+V D  TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVVNEYAWHNLFVHQLFIRPNEEELATHES-EFTIVSAPNFKADPAIDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSSNVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAIKFGSVLENVVIDGQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACHD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus halodurans GN=pckA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.457e-53
Identity = 104/208 (50.00%), Postives = 140/208 (67.31%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            L++V+  A+H+LF   + I+PT+EEL    TP+FTI +A  F  +       S   + I+   + ++I GT+YAGEMKK +FS+M+YL+P++ +LS+H   N+G +GDVA               D NR LIGDDEH WS+ GV NIEGGCYAKC++LS EKEP IWNAI+FG+VLEN++ DE T   DY D S+TENTRAAY +E I
Sbjct:  121 LQVVNEFAWHNLFAQQLFIQPTTEELTQH-TPEFTIVSAPGFKADPSVDGTRSEAFVIISFEERIVLIGGTEYAGEMKKSIFSVMNYLLPEQDVLSMHCSANVGVEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSERGVFNIEGGCYAKCVNLSYEKEPQIWNAIRFGSVLENVIVDEKTGLPDYNDTSLTENTRAAYSLEAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain G9842) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.457e-53
Identity = 101/208 (48.56%), Postives = 142/208 (68.27%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    +  FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AIKFG+VLEN++ +  TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-GFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAIKFGSVLENVIINNQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACHK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis subsp. konkukian GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACCZ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ZK / E33L) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACCQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain Q1) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACC7 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH187) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACC3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain 03BB102) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACC1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ATCC 10987) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1 
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACWK7.241e-5349.52Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACHD9.457e-5350.00Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC29.457e-5348.56Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACHK1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCZ1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCR1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCQ1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC71.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC31.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC11.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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