FC931346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41 Identity = 95/209 (45.45%), Postives = 123/209 (58.85%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R V+ A+ + F+ NM IRP+ EELE+F DF +YNA + Y + S + N+ VI GT Y GEMKKG+FS+M+Y +P LS+H N+G+ DVA D R LIGDDEH W D GV N EGGCYAK I+L+ E EP+I+ AIK +LEN+V + VDY D S TENTR +YPIE+I Sbjct: 116 VRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACSK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus clausii (strain KSM-K16) GN=pckA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41 Identity = 87/201 (43.28%), Postives = 120/201 (59.70%), Query Frame = 1 Query: 25 AYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 A+H LF + IR + + G FTI +A F + S + I+ ++ ++I GT+YAGEMKK +FS+M+YL+P+ +L +H N +G+ A +R LIGDDEH WS+ G+ NIEGGCYAKCI LS+E EP IW+AI FG VLEN+V D +T + D+ +TENTRAAYP+E I Sbjct: 128 AWHHLFARQLFIREQAPS--NNGLEPFTIISAPTFKADPSVDGTRSEAFVIISFEQRIILIGGTEYAGEMKKAIFSVMNYLLPEAGVLPMHCSANTTDEGETALFFGLSGTGKTTLSASEHRRLIGDDEHGWSEKGIFNIEGGCYAKCIGLSKESEPQIWDAIAFGAVLENVVVDPNTGKPDFKSGELTENTRAAYPLEAI 326
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_AGRVS (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pckA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41 Identity = 91/208 (43.75%), Postives = 123/208 (59.13%), Query Frame = 1 Query: 7 RIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 R+V+ A+HSLF+ N+ IRP L DF FTI + F + H + T I + ++I GT YAGEMKK +F+ ++Y++P +Q++ +H N+G GD A D R LIGDDEH W ++G+ N EGGCYAK I LS E EP+I+ K FGTVLEN+V DE+ R D+ D S TENTR AYP+ +I Sbjct: 125 RVVTELAWHSLFIRNLLIRPERAALADFEAK-FTIIDLPSFKADPARHGCRTETVIACDFTNNIVLIAGTYYAGEMKKSVFTALNYMLPAKQVMPMHCSANVGPAGDSAVFFGLSGTGKTTLSADPARTLIGDDEHGWGEDGIFNFEGGCYAKTIRLSAEAEPEIYATTKRFGTVLENVVLDEN-RVPDFNDGSKTENTRCAYPLNFI 330
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ECOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=pckA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 91/209 (43.54%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+ +LEN+ E +D+ D S TENTR +YPI +I Sbjct: 135 VRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGSIDFDDGSKTENTRVSYPIYHI 341
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ECO7I (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=pckA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 91/209 (43.54%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+ +LEN+ E +D+ D S TENTR +YPI +I Sbjct: 135 VRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGSIDFDDGSKTENTRVSYPIYHI 341
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 95/209 (45.45%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R V+ A+ + F+ NM IRP+ EELE+F DF +YNA + Y + S + N+ VI GT Y GEMKKG+FS+M+Y +P LS+H N+G+ DVA D R LIGDDEH W D GV N EGGCYAK I+L E EP+I+ AIK +LEN+V + VDY D S TENTR +YPIE+I Sbjct: 116 VRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJE (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni GN=pckA PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 95/209 (45.45%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R V+ A+ + F+ NM IRP+ EELE+F DF +YNA + Y + S + N+ VI GT Y GEMKKG+FS+M+Y +P LS+H N+G+ DVA D R LIGDDEH W D GV N EGGCYAK I+L E EP+I+ AIK +LEN+V + VDY D S TENTR +YPIE+I Sbjct: 116 VRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 95/209 (45.45%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R V+ A+ + F+ NM IRP+ EELE+F DF +YNA + Y + S + N+ VI GT Y GEMKKG+FS+M+Y +P LS+H N+G+ DVA D R LIGDDEH W D GV N EGGCYAK I+L E EP+I+ AIK +LEN+V + VDY D S TENTR +YPIE+I Sbjct: 116 VRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_THET8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pckA PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41 Identity = 91/213 (42.72%), Postives = 130/213 (61.03%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRP----TSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R+V+ +H+LF NM I P +E+E F P FT+ +A F S + I+ R+ ++I+GT+YAGE+KK +F++M+YLMPKR + +H+ N+GK+GDVA D R LIGDDEH WS++GV N EGGCYAK I LS E EP I+ A +F +LEN+V + +R V + D S TENTR++YPI ++ Sbjct: 116 VRVVTESPWHALFARNMFILPRRFGNDDEVEAF-VPGFTVVHAPYFQAVPERDGTRSEVFVGISFQRRLVLIVGTKYAGEIKKSIFTVMNYLMPKRGVFPMHASANVGKEGDVAVFFGLSGTGKTTLSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNQFEAILENVVVNPESRRVQWDDDSKTENTRSSYPIAHL 327
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SHISS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella sonnei (strain Ss046) GN=pckA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41 Identity = 91/209 (43.54%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627 +R ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+ +LEN+ E +D+ D S TENTR +YPI +I Sbjct: 135 VRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341 The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bpback to top |