FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_YERPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pckA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.358e-41
Identity = 93/210 (44.29%), Postives = 125/210 (59.52%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            ++R ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  133 QVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_YERP3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=pckA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.358e-41
Identity = 93/210 (44.29%), Postives = 125/210 (59.52%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            ++R ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  133 QVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_PASMU (Phosphoenolpyruvate carboxykinase [ATP] OS=Pasteurella multocida GN=pckA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.358e-41
Identity = 95/209 (45.45%), Postives = 120/209 (57.42%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +RIV+  A+ + F+ NM IRPT  EL  F  PDF + N  +     +    + S   +  NL     +I GT Y GEMKKG+FS+M+Y +P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI+ AIK   +LEN+V       VDY D S TENTR +YPI +I
Sbjct:  133 VRIVTEVAWQAHFVKNMFIRPTEAELVGF-KPDFVVMNGSKVTNPNWKEQGLNSENFVAFNLTEGVQLIGGTWYGGEMKKGMFSMMNYFLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGVFNYEGGCYAKTIKLSPENEPDIYKAIKRDALLENVVV-RADGSVDYDDGSKTENTRVSYPIYHI 339          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_METRJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=pckA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.358e-41
Identity = 87/212 (41.04%), Postives = 128/212 (60.38%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKD--GDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K R+ +  A+HSLF+ N+ IRP   E+  +  PD TI +   F  +   H   S T I I+ ++K ++I G+ YAGEMKK +F+ ++Y++P + ++ +H   N   D  G  A               D +R L+GDDEH WS++G+ N EGGCYAK I LSR  EP+I+    +FGTV+EN++ D  TR  D+ D S+TENTR AYP+++I
Sbjct:  123 KARVFTEFAWHSLFIRNLLIRPDRSEIASY-VPDMTIIDLPSFQADPARHGCRSKTVIAIDFSKKLVLIGGSAYAGEMKKSVFTYLNYILPGQGVMPMHCSANAALDAEGGSAIFFGLSGTGKTTLSNDSSRQLLGDDEHGWSNSGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVIIDPVTRVPDFDDASLTENTRCAYPLDFI 333          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SALTY (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhimurium GN=pckA PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  134 VRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SALTI (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhi GN=pckA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  134 VRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SALSV (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella schwarzengrund (strain CVM19633) GN=pckA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  134 VRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SALPK (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A (strain AKU_12601) GN=pckA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  134 VRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SALPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi C (strain RKS4594) GN=pckA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  134 VRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SALPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pckA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  134 VRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_YERPA6.358e-4144.29Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]
PCKA_YERP36.358e-4144.29Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]
PCKA_PASMU6.358e-4145.45Phosphoenolpyruvate carboxykinase [ATP] OS=Pasteur... [more]
PCKA_METRJ6.358e-4141.04Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_SALTY8.304e-4144.02Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALTI8.304e-4144.02Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALSV8.304e-4144.02Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPK8.304e-4144.02Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPC8.304e-4144.02Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPB8.304e-4144.02Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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