FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:20..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACC0 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH820) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACAN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACAH (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis (strain Al Hakam) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACAA (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis (strain A0248) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACC4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain B4264) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.751e-52
Identity = 100/208 (48.08%), Postives = 142/208 (68.27%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF+H + IRPT EEL    +  FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  121 IQVINEYAWHNLFVHQLFIRPTEEELTTHES-GFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_OCEIH (Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanobacillus iheyensis GN=pckA PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.046e-51
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++++  A+H+LF   + I PT EEL +    +FT+ +A  F  +       S T I I+  ++ ++I GT+YAGE+KK +FS+M+YL+P++ +LS+H   N+G++GDVA               D  R LIGDDEH WS NGV NIEGGCYAKCI+LS EKEP I+NAI++GTVLEN++ ++++RE DY D S+TENTRAAYP+E I
Sbjct:  119 IQVINEYAWHNLFSRQLFITPTEEELNNHQA-EFTVISAPGFKADPAIDGTNSETFILISFKKRIVLIGGTEYAGEIKKSIFSVMNYLLPQQDVLSMHCSANVGQEGDVALFFGLSGTGKTTLSADPYRKLIGDDEHGWSPNGVFNIEGGCYAKCINLSEEKEPQIYNAIRYGTVLENVILNDNSREPDYDDTSLTENTRAAYPLENI 325          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_STACT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus carnosus (strain TM300) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51
Identity = 101/209 (48.33%), Postives = 142/209 (67.94%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +L +V+  A+H+LF HNM IRP+S++  +   P+FTI +A  F  N       S T + I+   + ++I GT+YAGEMKKG+FS+M+YL+P++ I+S+H   N+G+ GDVA                 +R LIGDDEH W+ NG+ NIEGGCYAK I+LS+EKEP I++AI++GT+LEN+V +E    VD+ D   TENTRAAYPI+YI
Sbjct:  122 RLTVVNEMAWHNLFAHNMFIRPSSKDEAEKIKPNFTIVSAPHFKANPEEDGTASETFVIISFKHRIILIGGTEYAGEMKKGIFSVMNYLLPQQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYDAIRYGTILENVVVEE-DGNVDFDDNKYTENTRAAYPIDYI 329          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_BACSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus subtilis GN=pckA PE=3 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 2.329e-51
Identity = 104/208 (50.00%), Postives = 136/208 (65.38%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            + +V+  A+H+LF   + IRP   + +    P FTI +A  F  +  T    S T I ++  ++ ++I GT+YAGEMKK +FS+M++L+P+R ILS+H   N+G+ GDVA               D +R LIGDDEH WSD GV NIEGGCYAKCI LS EKEP I+NAI+FG+VLEN+V DE TRE +Y D   TENTRAAYPI  I
Sbjct:  121 ITVVNEFAWHNLFARQLFIRPEGNDKKTVEQP-FTILSAPHFKADPKTDGTHSETFIIVSFEKRTILIGGTEYAGEMKKSIFSIMNFLLPERDILSMHCSANVGEKGDVALFFGLSGTGKTTLSADADRKLIGDDEHGWSDTGVFNIEGGCYAKCIHLSEEKEPQIFNAIRFGSVLENVVVDEDTREANYDDSFYTENTRAAYPIHMI 327          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ALKOO (Phosphoenolpyruvate carboxykinase [ATP] OS=Alkaliphilus oremlandii (strain OhILAs) GN=pckA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.189e-51
Identity = 98/208 (47.12%), Postives = 136/208 (65.38%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+++  AY +LF   M I+P + E E+F  P+FT+        +       S   I +N A+K ++I GT+Y+GE+KK +F++M+YL+P + +L +H   N+G+DG+VA               D+NR LIGDDEH W+ NGV N EGGCYAKCI+L+ E+EP IWNAIK G +LENIV DE+T  +DY D   TENTRAAYP+EYI
Sbjct:  119 IRVINEFAYQNLFASQMFIKPKAGERENFD-PEFTVLALPDLKADPAVDGTNSEVFIILNFAQKIVLIGGTRYSGEIKKSIFTVMNYLLPFKDVLPMHCSANIGEDGNVALFFGLSGTGKTTLSADNNRKLIGDDEHGWTANGVFNFEGGCYAKCINLTEEQEPQIWNAIKHGAILENIVIDENTGHIDYDDDRYTENTRAAYPVEYI 325          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_GEOTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 100/208 (48.08%), Postives = 139/208 (66.83%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++V+  A+H+LF+H + IRP++EEL D   P FT+  A  F  +       S   I I+  ++ ++I GT+YAGEMKK +FS+M+YL+P++ IL +H   N+G++GDVA               D  R LIGDDEH WS  G+ NIEGGCYAKCI+LSREKEP I++AI FG VLEN++  + TR  DY D ++TENTRAAYP++ I
Sbjct:  121 IQVVNEFAWHNLFVHQLFIRPSAEELADH-EPQFTVICAPNFKADPAVDGTRSEAFIIISFEQRTVLIGGTEYAGEMKKSIFSVMNYLLPEQGILPMHCSANVGQEGDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWSSRGIFNIEGGCYAKCINLSREKEPQIFDAIGFGAVLENVILHDATRVPDYDDGTLTENTRAAYPLQAI 327          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACC01.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAN1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAH1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAA1.235e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC42.751e-5248.08Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_OCEIH1.046e-5148.08Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanob... [more]
PCKA_STACT1.783e-5148.33Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BACSU2.329e-5150.00Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_ALKOO5.189e-5147.12Phosphoenolpyruvate carboxykinase [ATP] OS=Alkalip... [more]
PCKA_GEOTN1.510e-5048.08Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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