FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:20..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SHEPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=pckA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49
Identity = 97/208 (46.63%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  109 VRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPARDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS195) GN=pckA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49
Identity = 97/208 (46.63%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  109 VRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPERDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS185) GN=pckA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49
Identity = 97/208 (46.63%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  109 VRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPARDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_SHEON (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella oneidensis GN=pckA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.719e-49
Identity = 97/208 (46.63%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  109 VRVTTQYAWHQLFARNLFIIP--EEFNRQNKPVWQIINAPDFVCMPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_RUBXD (Phosphoenolpyruvate carboxykinase [ATP] OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.719e-49
Identity = 98/209 (46.89%), Postives = 134/209 (64.11%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQ-ILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +++V   A+ +LF   +  RP+ EEL+ F  PD+T+ +      +       S T + I+  R+ ++I GT+YAGE+KK +FS++++++P    +  +H   N+G  GDVA               D  RYLIGDDEH WSD G+ N EGGCYAKCIDLSREKEP I++AI+FG VLEN+V D  TR VDY D S+TENTRAAYP+EYI
Sbjct:  123 VQVVCEYAWQALFTRQLFRRPSREELDAF-EPDWTVISVPGLLTDPEEDGTESETFVGIDFGRRVVLICGTRYAGEIKKSIFSVLNFVLPTEHGVFPMHCSANVGPGGDVALFFGLSGTGKTTLSSDPERYLIGDDEHGWSDEGIFNFEGGCYAKCIDLSREKEPQIYDAIRFGAVLENVVVDRITRRVDYSDASLTENTRAAYPLEYI 330          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA2_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.857e-49
Identity = 95/208 (45.67%), Postives = 131/208 (62.98%), Query Frame = 1
Query:    4 LRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            +R+V+  A+ +LF+H + +RP++ ELE    P FT+  A  F          S   + +N  R+ ++I GT YAGEMKK +F++M+YL+P+R +  +H   NMG  GD A               D  R LIGDDEH WSD+G+ N EGGCYAKCI LS E EP IWNAI+FG+VLEN+  D  +R +DY   ++TENTRAAYP+++I
Sbjct:  119 IRVVNQYAWQNLFVHQLFVRPSAAELEAH-EPQFTVICAPGFQATPEVDGTRSEAFVVLNFDRRLIIIGGTSYAGEMKKSIFTVMNYLLPERGVCPMHCSANMGPAGDTALFFGLSGTGKTTLSADPERRLIGDDEHGWSDHGIFNFEGGCYAKCIKLSAEHEPQIWNAIRFGSVLENVAVDPDSRAIDYDCDALTENTRAAYPVDFI 325          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_STAAW (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MW2) GN=pckA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.343e-49
Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            KL +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  122 KLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_STAAU (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus GN=pckA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.343e-49
Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            KL +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  122 KLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_STAAT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=pckA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.343e-49
Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            KL +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  122 KLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_STAAS (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MSSA476) GN=pckA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.343e-49
Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            KL +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  122 KLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_SHEPC2.180e-4946.63Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEB92.180e-4946.63Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEB82.180e-4946.63Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEON3.719e-4946.63Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_RUBXD3.719e-4946.89Phosphoenolpyruvate carboxykinase [ATP] OS=Rubroba... [more]
PCKA2_MOOTA4.857e-4945.67Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moore... [more]
PCKA_STAAW6.343e-4948.80Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAU6.343e-4948.80Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAT6.343e-4948.80Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAS6.343e-4948.80Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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