FC931349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_YEREN (Chaperone protein clpB OS=Yersinia enterocolitica GN=clpB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 55/158 (34.81%), Postives = 91/158 (57.59%), Query Frame = 2 Query: 29 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 D EK + + + L+ Q+ L+ + + +AE A I +IV+ WTGI V ++ D+ ++++ + L +RVIGQ A+ +S I AR G+ +P +P+ F+ GP+GVGK+E A A+A +G E+ +I ++MSE+ E HTVS L Sbjct: 520 DEEKRQQYQQQLAQLEEQL-LLIRSAQPLVQAEVNA---------TVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSL 667
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPA_ECOLI (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli (strain K12) GN=clpA PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 155 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 V DI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERHTVS+L Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERHTVSRL 533
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPA_ECOL6 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O6 GN=clpA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 155 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 V DI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERHTVS+L Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERHTVSRL 533
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPA_ECO57 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O157:H7 GN=clpA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 155 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 V DI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERHTVS+L Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERHTVSRL 533
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_RAT (Caseinolytic peptidase B protein homolog OS=Rattus norvegicus GN=Clpb PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 227 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERHTVSK 499 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH V+K Sbjct: 302 EERRRFPLEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAK 392
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_MOUSE (Caseinolytic peptidase B protein homolog OS=Mus musculus GN=Clpb PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.727e-13 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 227 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERHTVSK 499 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH V+K Sbjct: 302 EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAK 392
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_HUMAN (Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.727e-13 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 227 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERHTVSK 499 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH V+K Sbjct: 332 EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAK 422
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_BOVIN (Caseinolytic peptidase B protein homolog OS=Bos taurus GN=CLPB PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.727e-13 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 227 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERHTVSK 499 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH V+K Sbjct: 302 EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAK 392
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: ADPR_RHOER (ATP-dependent protease ATP-binding subunit-like protein OS=Rhodococcus erythropolis PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.903e-11 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 245 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 487 ++ + L +++GQ AV A+ RAI A VG +P RP+A+ + GPTGVGK+EL + +AA + + R+DM+ + H Sbjct: 35 RLSKALSSKIVGQQAAVDAVVRAISIAHVGATDPTRPLANILLVGPTGVGKTELVRRVAAELRSGPDDLCRIDMNALAQEH 115
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: AMIB_PSEAE (ATP-dependent protease ATP-binding subunit-like protein amiB OS=Pseudomonas aeruginosa GN=amiB PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11 Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 254 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 + L V+GQD A++A+ ++ R + +P RP+ S +F GPTGVGK+E+ +ALA G E R+DM+ + H + L Sbjct: 55 DCLRAEVLGQDPALQAVEDMLKVVRADIADPRRPLFSALFLGPTGVGKTEIVRALARALHGDAEGFCRVDMNTLSQEHYAAAL 137 The following BLAST results are available for this feature:
BLAST of FC931349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931349 ID=FC931349; Name=FC931349; organism=Citrus clementina; type=EST; length=502bpback to top |