FC931349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 3.680e-39 Identity = 79/160 (49.38%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 35 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV----VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E+A + D + Q + + K+++ A G + VTE+++ +++ WTGIPV ++ E D+LL+ME+ LH+RVIGQDEAV+A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H+VS+L Sbjct: 487 EQARRVGDLARMSELQYGTIPELEKQLAAATALEGKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLKSERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRL 646
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.806e-39 Identity = 85/168 (50.60%), Postives = 120/168 (71.43%), Query Frame = 2 Query: 14 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEV----DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 A R +F++AGEL + + KE+++AE++ G P+V EV +I HIVS WTGIPV+K+ E D+LL+ME+ L K V+GQ +AV+A+SRA+RR+R GL++PNRPI SFIF GPTGVGK+EL KALA + F E A++R+DMSE+ME+H+V++L Sbjct: 490 AQRKGEFQRAGELA---------YGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARL 648
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 8.198e-39 Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 +KNEA + +DFEKA RD+ + K +E+ K E D+ PV+TE DI+ IV T IPV + E +L+ + + L VIGQDEAV IS+AIRR+RVGL PNRPI SF+F GPTGVGK+ELAK LA FGS E+MIR DMSE+ME+H+V+KL Sbjct: 368 KKNEATKAEDFEKAAHFRDQ-----------ISKLRELQKQEVTDEDM-PVITEKDIEQIVEQKTQIPVGDLKEKEQTQLINLADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKL 522
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 8.198e-39 Identity = 88/171 (51.46%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGEL---RDREMDLK-AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E A R +F+KAGEL R E++ + A I A + G+ M +A VT I +VS WTG+PV+K+ E D+LLKME++L KRV+GQ EAV A++ A+RR+R GL++PNRP+ SF+F GPTGVGK+EL KALA Y F E AM+RLDMSE+ME+H+VS+L Sbjct: 487 ELANAQRRGEFQKAGELAYGRIPELERQLADIEAKENSGEMMEEA----------VTANHIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRL 647
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 8.198e-39 Identity = 85/173 (49.13%), Postives = 118/173 (68.21%), Query Frame = 2 Query: 11 EAVRGQDFEKAGEL---------RDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 +A R D KA +L RDRE +A++ L +G + + + VTE DI IV+ WTGIPV ++ E +LL++E LH+RVIGQ EAV+A+S AIRRAR G+K+PNRPI SF+F GPTGVGK+ELA+ALA + F +++A++RLDMSE+ME+H+VS+L Sbjct: 493 QAERAYDLNKAAQLKYGKLEGVQRDREAK-EAKLLELQSQGSTLLREQ---------VTEADIAEIVAKWTGIPVNRLLESERQKLLQLESHLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRL 655
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.398e-38 Identity = 85/166 (51.20%), Postives = 115/166 (69.28%), Query Frame = 2 Query: 11 EAVRGQDFEKAGELRDREMD-LKAQISALVD-KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 +A R D K E++ ++ L+ Q++A + K M + VT+ +I I++ WTGIPV ++ E D+LL+ME+ LHKRVIGQDEAV AIS AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H VS+L Sbjct: 488 QARRSGDLAKMSEIQYGKIPGLEKQLAAATQAESKHMKLLRNK-------VTDAEIADILARWTGIPVARMLESEKDKLLRMEQELHKRVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHAVSRL 646
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.398e-38 Identity = 87/169 (51.48%), Postives = 116/169 (68.64%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELR-DREMDLKAQIS-ALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E +A R D K EL+ R DL+ Q+ A +GKEM+ VT+ +I ++S TGIPV K+ E ++LL+ME+ LHKRVIGQ+EAV A++ AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA + F SE+AM+R+DMSEFME+H+VS+L Sbjct: 485 ELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEGKEMTLLRYR-------VTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRL 646
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 2.385e-38 Identity = 85/175 (48.57%), Postives = 116/175 (66.29%), Query Frame = 2 Query: 5 KNEAVRGQDFEKAG----ELRDREMDLKAQISALVDKGKEMSKAETEAGD-----VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 K + +RG+ E A +++ R +L+A+I + + E GD + VTE +I +VS WTG+PV ++ E +LL MEE LH+RV+GQDEAV A+S A+RR+R GL++PNRPI SF+F GPTGVGK+EL KALA F E AM+R+DMSEFMERH+VS+L Sbjct: 495 KEKQLRGESPEDAYSEMLQVQSRLRELQARIDEAEKHDDSADQTKEEPGDEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRL 669
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.385e-38 Identity = 86/172 (50.00%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 11 EAVRGQDFEKA-----GELRDREMDLKAQISALVD---KGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 +A R D+EKA GEL + D++ + S L++ G + + + VTE DI IV+ WTGIP+ ++ E +LL++E LH+RVIGQ EAV A+S AIRRAR G+K+P+RPI SF+F GPTGVGK+ELA+ALA + F SEEAM+R+DMSE+ME+H VS+L Sbjct: 499 KAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLREQ---------VTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRL 661
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.069e-38 Identity = 88/171 (51.46%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKA-ETEAGDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E A R QD+ K E+ Q L K+M A E E D V VT +I +VS WTGIPV K+ E D+LL+ME+ LH+RV+GQ+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S EAMIR+DMSEFME+H+VS+L Sbjct: 485 ELEAAQRRQDYAKMSEI---------QYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRL 646 The following BLAST results are available for this feature:
BLAST of FC931349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931349 ID=FC931349; Name=FC931349; organism=Citrus clementina; type=EST; length=502bpback to top |