FC931349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.002e-36 Identity = 83/168 (49.40%), Postives = 114/168 (67.86%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREMD-LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E EA D KA ELR ++ ++ ++ L + +E + E + VTE +I IV WTGIPV K+ E ++LLK+ + LH++VIGQD+AV+ +S A+ RAR G+K+P RPI SFIF GPTGVGK+ELAKALA F SE+ MIR+DMSE+ME+H+VS+L Sbjct: 487 ELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRI--LQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRL 652
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.709e-36 Identity = 83/170 (48.82%), Postives = 112/170 (65.88%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E ++ R D KA E+ L +I L + E S AE ++ V VT DI +VSAWTG+PV K+ ES++LL ME + KR++GQ AVKA+S A+RR+R G+ +PNRP SF+F GPTGVGK+ELAKALA + F E AM+R+DMSE+ME+H+VS+L Sbjct: 486 EADKHTRDGDLAKASEI------LYGEIPELNKQLDEASAAEEDSQGKSMVSEEVTSDDIAEVVSAWTGVPVGKMLEGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFMFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRL 649
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 1.709e-36 Identity = 82/168 (48.81%), Postives = 115/168 (68.45%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E EA + EKA LR ++ +++ ++ A+ +K K + V VTE I +V TGIP+ K+ E ++LL + ETLH+RV+GQDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK+ELAKALA F SEE M+R+DMSE+ME+H+VS+L Sbjct: 487 ELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAKS-----DDLSLVQESVTEEQIAEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRL 649
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.709e-36 Identity = 82/168 (48.81%), Postives = 115/168 (68.45%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E EA + EKA LR ++ +++ ++ A+ +K K + V VTE I +V TGIP+ K+ E ++LL + ETLH+RV+GQDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK+ELAKALA F SEE M+R+DMSE+ME+H+VS+L Sbjct: 487 ELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAKS-----DDLSLVQESVTEEQITEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRL 649
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.709e-36 Identity = 80/173 (46.24%), Postives = 116/173 (67.05%), Query Frame = 2 Query: 8 NEAVRGQDFEKAGELRDREMD--------LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 N+A R D K EL+ +++ ++ QI AL G+ + + + E E DI IV+ WT IPV+++ E +LL++E LH+RVIGQDEAV A++ AIRRAR G+K+P+RPI SF+F GPTGVGK+ELA+ALA F +E+A+IR DMSE+ME++++S+L Sbjct: 495 NQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQTLLREQVE---------EADIAEIVARWTNIPVQRLLESERQKLLQLESFLHQRVIGQDEAVVAVAAAIRRARAGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRL 658
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.916e-36 Identity = 84/171 (49.12%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E E R F+K EL+ ++ +L+A++ A E E+++G + T+V +I +VS TGIPV K+ E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++L Sbjct: 484 EMAELQRKGQFDKLAELQYGKLPELEARLKAA--DSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARL 652
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.916e-36 Identity = 84/171 (49.12%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E E R F+K EL+ ++ +L+A++ A E E+++G + T+V +I +VS TGIPV K+ E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++L Sbjct: 484 EMAELQRKGQFDKLAELQYGKLPELEARLKAA--DSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARL 652
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.916e-36 Identity = 84/171 (49.12%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E E R F+K EL+ ++ +L+A++ A E E+++G + T+V +I +VS TGIPV K+ E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++L Sbjct: 484 EMAELQRKGQFDKLAELQYGKLPELEARLKAA--DSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARL 652
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_ENTFA (Chaperone protein clpB OS=Enterococcus faecalis GN=clpB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.808e-36 Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E +A D E+A LR + L+ ++ L +K A+ V VTE +I +V TGIPV K+ E ++L+K+ ETLHKRVIGQDEAV A+S A+ R+R GL++PNRP+ SF+F GPTGVGK+ELAKALA F SE+ M+R+DMSE+ME+H VS+L Sbjct: 487 ELEDAENNYDLERAAVLRHGTIPQLEHELKELEEKN-----AKDNVKMVQESVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRL 649
BLAST of FC931349 vs. ExPASy Swiss-Prot
Match: CLPB_PARUW (Chaperone protein clpB OS=Protochlamydia amoebophila (strain UWE25) GN=clpB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.974e-36 Identity = 86/172 (50.00%), Postives = 113/172 (65.70%), Query Frame = 2 Query: 2 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-----VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 502 E+ A R D+ + ELR +L Q+ KE+ +A+T+ + + V E I IVS WTGIPV K+ E++RLL +E L KRV+GQ+ AV A+S AIRR+R GL +PNRP+ F+F GPTGVGK+ELAKALA F +EA+IRLDMSE+ME+HTVSKL Sbjct: 485 EEEAAERKADYNRVAELR---YNLIPQLQ------KEIEEAQTQLNNKPNRLLQEEVDESLIAQIVSKWTGIPVHKMLEGEAERLLHLENELEKRVVGQEIAVSAVSEAIRRSRSGLSDPNRPMGVFLFLGPTGVGKTELAKALAFQLFNQDEALIRLDMSEYMEKHTVSKL 647 The following BLAST results are available for this feature:
BLAST of FC931349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931349 ID=FC931349; Name=FC931349; organism=Citrus clementina; type=EST; length=502bpback to top |