FC931350

Overview
NameFC931350
Unique NameFC931350
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig868 contig Ccv1_Contig868:4..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_BACCN (Acireductone dioxygenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=mtnD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12
Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 3
Query:  225 ELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            E+  + + RGY   D   +     PN +E + NF +EH HTD+E+R+ V+G G F ++  + ++  + ++ G +I +P    H FTL  D  + A+R+FV    W P
Sbjct:   63 EIADVSQRRGYKAHDIISLS-SATPNLDELLINFKQEHHHTDDEVRFIVSGHGIFAIQGKDGRFFDVELEPGDLISVPENVRHYFTLQDDRQVVAIRIFVTTAGWVP 168          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_BACC1 (Acireductone dioxygenase OS=Bacillus cereus (strain ATCC 10987) GN=mtnD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  222 EELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            +E+  +   RGY   D   +     PN +E + NF +EH HTD+E+R+ V+G G F +   +  +  + ++ G +I +P    H FTL  D  + A+R+FV    W P
Sbjct:   62 KEIADVSSRRGYKAHDVISLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVP 168          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_BACCZ (Acireductone dioxygenase OS=Bacillus cereus (strain ZK / E33L) GN=mtnD PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  222 EELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            +E+  +   RGY   D   +     PN +E + NF +EH HTD+E+R+ V+G G F +   +  +  + ++ G +I +P    H FTL  D  + A+R+FV    W P
Sbjct:   62 KEIADVSARRGYKAHDVISLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVP 168          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_BACAN (Acireductone dioxygenase OS=Bacillus anthracis GN=mtnD PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  222 EELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            +E+  +   RGY   D   +     PN +E + NF +EH HTD+E+R+ V+G G F +   +  +  + ++ G +I +P    H FTL  D  + A+R+FV    W P
Sbjct:   62 KEIADVSARRGYKAHDVISLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVP 168          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_BACAH (Acireductone dioxygenase OS=Bacillus thuringiensis (strain Al Hakam) GN=mtnD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  222 EELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            +E+  +   RGY   D   +     PN +E + NF +EH HTD+E+R+ V+G G F +   +  +  + ++ G +I +P    H FTL  D  + A+R+FV    W P
Sbjct:   62 KEIADVSVRRGYKAHDVISLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVP 168          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_BACHK (Acireductone dioxygenase OS=Bacillus thuringiensis subsp. konkukian GN=mtnD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 3
Query:  222 EELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            +E+  +   RGY   D   +     PN +E + NF +EH HTD+E+R+ V+G G F +   +  +  + +  G +I +P    H FTL  D  + A+R+FV    W P
Sbjct:   62 KEIADVSARRGYKAHDVISLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELDPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVP 168          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_LEPBP (Acireductone dioxygenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mtnD PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  234 KIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            ++++  GY   D   V  +++P   + +  F + H+HTDEE+RY + GSG F      E++  + V KG  I +PA   H FTLD    IKA+R F  +  WTP
Sbjct:   64 QLKKQHGYKANDLV-VLHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFIIDGERF-EVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFKDNSGWTP 165          
BLAST of FC931350 vs. ExPASy Swiss-Prot
Match: MTND_LEPBA (Acireductone dioxygenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mtnD PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  234 KIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 545
            ++++  GY   D   V  +++P   + +  F + H+HTDEE+RY + GSG F      E++  + V KG  I +PA   H FTLD    IKA+R F  +  WTP
Sbjct:   64 QLKKQHGYKANDLV-VLHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFIIDGERF-EVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFKDNSGWTP 165          
The following BLAST results are available for this feature:
BLAST of FC931350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
MTND_BACCN1.100e-1232.71Acireductone dioxygenase OS=Bacillus cereus subsp.... [more]
MTND_BACC14.180e-1232.41Acireductone dioxygenase OS=Bacillus cereus (strai... [more]
MTND_BACCZ5.459e-1232.41Acireductone dioxygenase OS=Bacillus cereus (strai... [more]
MTND_BACAN5.459e-1232.41Acireductone dioxygenase OS=Bacillus anthracis GN=... [more]
MTND_BACAH7.130e-1232.41Acireductone dioxygenase OS=Bacillus thuringiensis... [more]
MTND_BACHK9.312e-1232.41Acireductone dioxygenase OS=Bacillus thuringiensis... [more]
MTND_LEPBP1.216e-1136.54Acireductone dioxygenase OS=Leptospira biflexa ser... [more]
MTND_LEPBA1.216e-1136.54Acireductone dioxygenase OS=Leptospira biflexa ser... [more]

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Properties
Property NameValue
Genbank descriptionC34104B09EF PostHarvP1 Citrus clementina cDNA clone C34104B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931350 ID=FC931350; Name=FC931350; organism=Citrus clementina; type=EST; length=678bp
CAGGAGAATAGCCACCAAGCGTTCTTCAAAGAATTTCAGAAACCATGGTC
GCCCCTCAGGATCCTAGAGAGGAAGTTATTCAGGCATGGTACATGGATGA
TAGTGATGAAGATCAAAGACTCCCCCATCACAAGGATCCAAAGGAATTTG
TGTCCCTGGACCAGCTTTCTGAACTTGGAGTACTCAGCTGGCGATTAGAT
GCTGATAACTATGAAACTGATGAGGAACTGAAGAAGATTCGTGAAGATCG
CGGATATTCTTACATGGACTTTTGTGAGGTTTGCCCAGAAAAACTGCCAA
ATTATGAAGAGAAGATCAAAAACTTTTTCGAAGAACATCTTCATACAGAT
GAAGAGATCCGCTACTGTGTGGCAGGAAGTGGTTACTTTGATGTCAGGGA
CCATAATGAAAAATGGATTCGCATATGGGTAAAGAAAGGAGGAATGATTG
TTTTACCTGCTGGATGTTACCATCGCTTTACTTTGGATACAGACAACTAT
ATCAAGGCTATGCGTCTGTTTGTAGGTGATCCCGTTTGGACTCCATTCAA
CCGTCCCCATGATCATTTACCCGCAAGGAAGGGATATGTTCAAAATTTCT
TGCAGAAGGAAGCTGGTGACAGCCCTATCAATGCTGCTGCGTAATTTGTG
CAATTCCTTGCTCATTGGATCAATACTA
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