FC931353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: DBP8_COCIM (ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis GN=DBP8 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 7 IIFTETKESASQLADLLP--GAR--ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPR 306 IIF ++A L LL G R +LH + QS+R LA FR+ LVAT+VAARGLDI V L++ + PR+ + YIHR GRT RAG G A+ L R Sbjct: 365 IIFCNRTKTADLLDRLLRRLGHRVTSLHSLLPQSERTSNLARFRASAARLLVATDVAARGLDIPSVGLVVNFDVPRNPDDYIHRVGRTARAGREGEAITLVGQR 468
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: DBP8_ASPCL (ATP-dependent RNA helicase dbp8 OS=Aspergillus clavatus GN=dbp8 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 7 IIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRK-SSVSKIERESGVKFEHIS 363 IIF ++A L +L +LH + QS+R LA FR+ LVAT+VA+RGLDI V L++ + PR+ + Y+HR GRT RAG +G +V L R V IE G + E S Sbjct: 352 IIFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPSVSLVVNYDVPRNPDDYVHRVGRTARAGRSGESVTLVGQRDVQLVLAIEARVGRQMEEWS 475
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: SPB4_DEBHA (ATP-dependent rRNA helicase SPB4 OS=Debaryomyces hansenii GN=SPB4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 70 ALHGDIQQSQREVTLAGFRSGKFM----TLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY--DPRKSSVSKIERESGVKFEHISAPQPADI 384 +LHG + R TL F G M L+ T+VAARG+DI DV L+IQ +PP D + + HRSGRTGRA G A+++ + R+ G+ ++ P + I Sbjct: 309 SLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAARGIDIPDVDLVIQLDPPTDPDVFFHRSGRTGRANKVGQAIVMLNNNSREEDYVNFMEVKGMTMSNMECPNISKI 419
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: MAK5_LODEL (ATP-dependent RNA helicase MAK5 OS=Lodderomyces elongisporus GN=MAK5 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 4 TIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSG----KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSS 315 T++F + +S +L LL A A+H + Q QR +L F+ + LVA++VAARGLDI ++ + PR + YIHRSGRT RAG GV+VM P+++S Sbjct: 527 TLVFANSIDSVKRLVPLLNNLNIPAFAIHSSMIQKQRLRSLERFKDASEKNQTAVLVASDVAARGLDIPNIDHVAHYHLPRSADVYIHRSGRTARAGKEGVSVMFCSPQEAS 638
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: MAK5_CANAL (ATP-dependent RNA helicase MAK5 OS=Candida albicans GN=MAK5 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 58/188 (30.85%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 4 TIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSG----KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSS----------------VSKIERESGVKFEHIS-------APQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEEL 474 T++F + +S +L LL A ++H + Q QR L F+ + LVA++VAARGLDI ++ ++ PR + YIHRSGRT RAG GV+ M P+++S S++ + VK I P+ +K A + T T+ DS + K AAE+L Sbjct: 490 TLVFANSIDSVKRLVPLLNNLNIPAFSIHSSMIQKQRLRALEKFKEASQKNEVAVLVASDVAARGLDIPNIDHVVHYHLPRSADVYIHRSGRTARAGKEGVSAMFCSPQEASGPLRKLRRLVAGNSNKESRLNMHNDVKLLPIEMDLVSQIKPRVEISSKLADASISSTATRKEDSWV---KQAAEDL 674
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 1 RTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 288 + +IF T+ +L + L A++ D+QQ +R+ + FRSG L++T++ ARG+D+ V L+I + P + E YIHR GR GR G G+A+ Sbjct: 263 QAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGIAI 362
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 1 RTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 288 + +IF TK+ L + ++HGD+ Q R+ + FRSG+ L++T+V ARG+D+ V L+I + P + E YIHR GR+GR G GVA+ Sbjct: 265 QAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKGVAI 364
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: DRS1_SCLS1 (ATP-dependent RNA helicase drs1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=drs1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 48/124 (38.71%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 1 RTIIFTETKESASQLADL--LPGARA--LHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVA-VMLYDPRKSSVS---KIERESGVK 348 R I+F K+ A + + L G +A LHG + Q QR ++ FR GK L+AT++A+RGLDI V +I E P+ + Y+HR GRT RAG +G A + +P + V K R G K Sbjct: 515 RVIVFFRQKKEAHRARIIFGLSGLKATELHGSMSQEQRIKSVEAFRDGKASFLLATDLASRGLDIKGVDTVINYEAPQSHDIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGAK 638
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: DRS1_COCIM (ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis GN=DRS1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 1 Query: 1 RTIIFTETKESASQLADL--LPGARA--LHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVA-VMLYDPRKSSVS---KIERESGVKF-EHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEE 471 R I+F K+ A + + L G +A LHG + Q QR + FR GK L+AT++A+RGLDI V+ +I E P+ E Y+HR GRT RAG +G A + +P + V K R G K + P AD E A + ++ + K EE Sbjct: 566 RVIVFFRQKKEAHRARIIFGLLGLKAAELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGRAQGAKIVSRVVDPAVAD-------EWASKVEEMQAEIEDILKEEKEE 724
BLAST of FC931353 vs. ExPASy Swiss-Prot
Match: DRS1_BOTFB (ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) GN=drs1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 48/124 (38.71%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 1 RTIIFTETKESASQLADL--LPGARA--LHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVA-VMLYDPRKSSVS---KIERESGVK 348 R I+F K+ A + + L G +A LHG + Q QR ++ FR GK L+AT++A+RGLDI V +I E P+ + Y+HR GRT RAG +G A + +P + V K R G K Sbjct: 515 RVIVFFRQKKEAHRARIIFGLSGLKATELHGSMSQEQRIKSVEAFRDGKASFLLATDLASRGLDIKGVDTVINYEAPQSHDIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGAK 638 The following BLAST results are available for this feature:
BLAST of FC931353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931353 ID=FC931353; Name=FC931353; organism=Citrus clementina; type=EST; length=716bpback to top |