FC931355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.442e-26 Identity = 77/196 (39.29%), Postives = 106/196 (54.08%), Query Frame = 2 Query: 47 VSNKQVILSDYVTGFPKESDMKIITGSINLKVPEGSKDTLLLKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDT---NVPLSYYTGILGMPGLTAYGGLYELSSPKKGEYVYVSAASGAVGQLVGQFAKLVGCHVVGSAGSKEKVDLLK 625 V K L + G P +SD ++ T +++P +LL+ L+LS DPYMR +L K G + G V++V++S + + +V + W I + L K+L +PLS G +GMPGLTAY GL E+ K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EK+ LK Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIASKRL---------KEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTT-HFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 183 HSP 2 Score: 23.8682 bits (50), Expect = 9.442e-26 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 625 EQFGFDDAFNYK 660 +Q GFD AFNYK Sbjct: 183 KQIGFDAAFNYK 194
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 75/195 (38.46%), Postives = 102/195 (52.31%), Query Frame = 2 Query: 47 VSNKQVILSDYVTGFPKESDMKIITGSINLKVPEGSKDTLLLKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQL--LIKILDTNVPLSYYTGILGMPGLTAYGGLYELSSPKKGEYVYVSAASGAVGQLVGQFAKLVGCHVVGSAGSKEKVDLLK 625 V K L + G+P SD ++ T + P +LL+ L+L+ DPYMR +L K G+ + G V+KV++S + K +V W S+ L L+ +PLS G +GMPGLTAY GL E+ K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS EKV L+ Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFELKTAEL----PPLKNGEVLLEALFLTVDPYMRVAAKRL---------KEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ 183
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17 Identity = 58/161 (36.02%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELSSPKKG--EYVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNSLG 637 ++ LYLS DPYMR RM++ ++ ++ + + G GV + +S H N+ K D V + +I +L K+ V LSY+ G +GMPGLT+ G+ E G + + VS A+GA G L GQ +L+GC VVG G+ EK L + LG Sbjct: 41 VRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELG 201
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17 Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELSSPKKG--EYVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNSLGLMTLLTIRK 664 ++ LYLS DPYMR RM++ ++ ++ + + G G+ + +S H N K D V + +I L K+ V LSY+ G +GMPGLT+ G+ E G + + VS A+GA G + GQ L+GC VVG G+ EK LL + LG + +K Sbjct: 41 VRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKK 210
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 57/170 (33.53%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELSSPKKG--EYVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNSLGLMTLLTIRK 664 ++ LYLS DPYMR RM++ ++ ++ + + G G+ + +S H N K D V + +I L K+ V LSY+ G +GMPGLT+ G+ E G + + VS A+GA G + GQ +GC VVG G+ EK LL + LG + +K Sbjct: 41 VRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKK 210
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEECSLIQ-------SPQLLIKILDTNVPLSYYTGILGMPGLTAYGGLYELS--SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNSLG 637 ++ LYLS DPYMR +M++ ++A ++ + G G+ V +S H K D V W+ +++ PQL+ + LSY+ G +GMPGLT+ G+ E S + + VS A+GA G L GQ L+GC VVG G++EK L + LG Sbjct: 41 VRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELG 201
BLAST of FC931355 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 61/195 (31.28%), Postives = 96/195 (49.23%), Query Frame = 2 Query: 86 GFPKESDMKIITGSINLKVPEGSKDTLLLKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEECSLIQ-------SPQLLIKILDTNVPLSYYTGILGMPGLTAYGGLYELSSPKKG--EYVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNSLG 637 G P + ++ S+ + EG + ++ LYLS DPYMR +M++ ++A ++ + G G+ + +S H K D V W+ +++ PQL+ + LSY+ G +GMPGLT+ G+ E G + + VS A+GA G L GQ L+GC VVG G+ EK L + LG Sbjct: 16 GNPVAENFRVEEVSLPDTINEGQ---VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELG 201 The following BLAST results are available for this feature:
BLAST of FC931355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931355 ID=FC931355; Name=FC931355; organism=Citrus clementina; type=EST; length=685bpback to top |