FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHA--AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +L   T+ F  N ++G G +G V+ G L S  +   A+KK+   S Q   EF+A++  + RL+H+N V L G+C      +L Y++  NGSL  +L+ R      Q G VLSW  R KIA G A GL YLHE+ +  +IHRDIK SNVLI DD   ++ DF L+
Sbjct:  353 DLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRP----RQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLA 512          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++  T  F  +  +G G +G VY G L +G   AIK+L   S Q  EEF  +V +V++L+H N  +LLGYC+DG  ++L YEF  N SL   L   +  +      VL WQ+R KI  G A+G+ YLH  +   IIHRD+K+SN+L+  D   KI+DF ++
Sbjct:  340 IEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRR------VLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMA 494          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++ ++T NF    +IG+G +G VY G L +  AA      +S Q  +EF  +V ++ R+ HE  V L+GYC D     L YE    G+L + L G+ G        VLSW  R+KIA+ +A G+EYLH    P I+HRD+KS+N+L+ ++  AKIADF LS
Sbjct:  554 DVNKMTNNF--QVVIGKGGFGVVYQGCLNNEQAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCS------VLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLS 706          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = 2
Query:  242 TENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 700
            T+ F +   +G+G +G VY G L +G   A+K+L   S Q D EF  +VS+++RL+H N V+LLG+C +G  ++L YEF  N SL H I    K         +L+W+ R +I  G A+GL YLHE +   IIHRD+K+SN+L+  +   K+ADF
Sbjct:  350 TDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKR-------SLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADF 497          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL 706
            L++ TE+F  +  +G+G  G VY GIL  G   A+KKL  + ++  ++F  +V+++S ++H+N V+LLG  ++G   +L YE+  N SL  IL  +  V       +LSW+QR  I +G ++GLEYLH  ++  IIHRDIK+SN+L+  +   KIADF L
Sbjct:  311 LEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVH------ILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGL 464          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 78/230 (33.91%), Postives = 127/230 (55.22%), Query Frame = 2
Query:  104 NAYMVKSSAGTDGAYHASEAAPKGAQAVKV-------------QPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            +A +   S+G    Y A +    G++A  V             Q   + + S  ELK  T NF  ++++GEG +G V+ G +           +G   A+KKL+    Q  +E+LA+V+ + +  H + V+L+GYC++   R+L YEF   GSL + L  R+G+   QP   LSW+ R+K+A+GAAKGL +LH  ++  +I+RD K+SN+L+  +  AK++DF L+   P
Sbjct:    6 SAQVKAESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF-RRGLY-FQP---LSWKLRLKVALGAAKGLAFLH-SSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGP 229          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 63/174 (36.21%), Postives = 100/174 (57.47%), Query Frame = 2
Query:  218 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQ--------PDEEFLAQVSMVSRLKHENFVQLLGYCVD--GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +V ++ E T+ F  + ++G G+ G VY  ++ SG   A+KKL+++++         D  F A++  + +++H N V+L  +C      S +L YE+ S GSL ++LHG K          + W  R  IA+GAA+GL YLH    P IIHRDIKS+N+LI ++  A + DF L+
Sbjct:  808 TVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHS-------MDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLA 974          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            + V   S +EL+E T NF  +  +G+G +G VYYG LK G + A+K+L D + +  E+F  +V +++ L+H N V L G C    SR  +L YE+ +NG+L D LHG +    A P   L W  R+KIAV  A  L+YLH      IIHRD+KS+N+L+  +   K+ADF LS   P
Sbjct:  327 VGVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADHLHGPQ----ANPSS-LPWSIRLKIAVETASALKYLHAS---KIIHRDVKSNNILLDQNFNVKVADFGLSRLFP 494          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 65/172 (37.79%), Postives = 102/172 (59.30%), Query Frame = 2
Query:  203 EVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            E+P+   ++ ++K  T++F     IGEG +G V+ G+L  G   A+K+L + S+Q + EFL ++  +S L+H N V+L G+CV+    +LAYE+  N SL   L   K  +       + W  R KI  G AKGL +LHE++    +HRDIK++N+L+  D   KI+DF L+
Sbjct:  663 ELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIP-----MDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLA 829          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = 2
Query:  224 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +++  +TEN     +IG G+   VY  +LK+    AIK+L + + Q  ++F  ++ M+S +KH N V L  Y +     +L Y++  NGSL D+LHG    K       L W  R+KIA GAA+GL YLH    P IIHRD+KSSN+L+  D  A++ DF ++
Sbjct:  639 EDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKRLYSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKK------TLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIA 795          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LRKA2_ARATH7.158e-2742.07Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK25_ARATH7.158e-2740.99Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y1755_ARATH1.221e-2640.99Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH1.221e-2641.94Putative cysteine-rich receptor-like protein kinas... [more]
CRK1_ARATH1.221e-2640.63Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
APK1A_ARATH1.221e-2633.91Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y2317_ARATH1.595e-2636.21Probable leucine-rich repeat receptor-like protein... [more]
Y1839_ARATH1.595e-2641.81Probable serine/threonine-protein kinase At1g18390... [more]
RKF1_ARATH1.595e-2637.79Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH1.595e-2639.26LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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