FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14052 contig Ccv1_Contig14052:112..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.013e-29
Identity = 65/166 (39.16%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            E+  +T NF    ++G+G +G VY+G + +    A+K L  +S Q  +EF A+V ++ R+ H+N V L+GYC +G +  L YE+ +NG L + + G++G      G +L+W+ R+KI V +A+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P
Sbjct:  586 EVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRG------GSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFP 743          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.629e-29
Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            ++  + ++ ++K  T NF     IGEG +G VY G+L  G   A+K+L + SKQ + EF+ ++ M+S L+H N V+L G C++G   +L YE+  N SL   L G +  +       L W  R KI +G AKGL YLHE++   I+HRDIK++NVL+     AKI+DF L+    D
Sbjct:  652 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLH-----LDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDD 822          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.629e-29
Identity = 67/169 (39.64%), Postives = 105/169 (62.13%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            I+  E+ ++T NF    ++G+G +G VY+G L     A      +S Q  +EF A+V ++ R+ H + V L+GYC DG +  L YE+ +NG L + + G++G      G VL+W+ R++IAV AA+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P
Sbjct:  574 ITYPEVLKMTNNF--ERVLGKGGFGTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRG------GNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFP 734          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.629e-29
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  221 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK---QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL 706
            + ELK+ T  F     +G GSYG VY  +L  G   A+K+ +A+        EF  ++ ++  ++H N V LLGY  +   R+L YE+  +G+LHD LH      G  P   LSW  R+KIA+  AKGLEYLH +A+P IIH D+KSSNVL+  + VA++ADF L
Sbjct:  510 LSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLHS-----GFSP---LSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGL 666          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.433e-29
Identity = 68/167 (40.72%), Postives = 103/167 (61.68%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK-ADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            I   ++   T NF    LIG+G +G VY  IL  G  AAIK+    S Q   EF  ++ ++SR++H + V L GYC + +  +L YEF   G+L + L+G          P L+W+QR++I +GAA+GL+YLH   ++  IIHRD+KS+N+L+ + ++AK+ADF LS
Sbjct:  476 IPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSN-------LPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLS 635          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.433e-29
Identity = 71/219 (32.42%), Postives = 124/219 (56.62%), Query Frame = 2
Query:   77 DMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            D   A+D  + ++  S  G   +  +++    G+ A  +        S  E+K  T+NF  + ++G G +G+VY G +  G    AIK+ +  S+Q   EF  ++ M+S+L+H + V L+GYC +    +L Y++ ++G++ + L+  +        P L W+QR++I +GAA+GL YLH  A   IIHRD+K++N+L+ +  VAK++DF LS   P +
Sbjct:  478 DYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQN-------PSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTL 689          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++  + ++ ++K  T NF     IGEG +G VY G+L  G   A+K+L + SKQ + EF+ ++ M+S L+H N V+L G C++G   +L YE+  N SL   L G +  +       L W  R K+ +G AKGL YLHE++   I+HRDIK++NVL+     AKI+DF L+
Sbjct:  650 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLH-----LDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLA 815          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            E++ +T+NF    ++GEG +G VY+GIL      A+K L  S  Q  +EF A+V ++ R+ H N V L+GYC + ++  L YE+A NG L   L G +G      G  L W  R+KI V  A+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P
Sbjct:  567 EVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERG------GSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFP 724          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.856e-29
Identity = 73/169 (43.20%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  206 VPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            V   +  EL   T +F   + IG G YG+VY G L  G   A+K+ +  S Q  +EF  ++ ++SRL H N V LLGYC     ++L YE+  NGSL D L  R      QP   LS   R++IA+G+A+G+ YLH +ADP IIHRDIK SN+L+      K+ADF +S
Sbjct:  616 VKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARF----RQP---LSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGIS 777          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29
Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            ELK  T++F  +  +GEG +G VY G L  G   A+K L   S+Q   +F+A++  +S ++H N V+L G C +G  R+L YE+  NGSL   L G K +        L W  R +I +G A+GL YLHE+A   I+HRD+K+SN+L+    V K++DF L+    D
Sbjct:  685 ELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLH-------LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDD 844          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLK6_ARATH2.013e-2939.16Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5343_ARATH2.629e-2939.77Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH2.629e-2939.64Probable LRR receptor-like serine/threonine-protei... [more]
ACCR1_ARATH2.629e-2943.03Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y2232_ARATH3.433e-2940.72Probable receptor-like protein kinase At2g23200 OS... [more]
FERON_ARATH3.433e-2932.42Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y5344_ARATH4.484e-2939.77Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH4.484e-2941.57Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH5.856e-2943.20Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH9.988e-2940.12Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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