FC931357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.738e-39 Identity = 90/195 (46.15%), Postives = 114/195 (58.46%), Query Frame = 2 Query: 122 RIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 ++ +G GEAS PD + L E +FVF G G+ M T G ST G L + +L A + V + G +ISGGHVNPAVT VGGH+TL RS LY AQ+L S AC LL++ TGGL T AL+ GV VV E V TF L++ +YAT +DP+K L P+ G +VGAN +AG A GASM Sbjct: 3 KLTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKG--STAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASM 194 HSP 2 Score: 25.0238 bits (53), Expect = 2.738e-39 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 703 DPAVSFGPAVVSWTW 747 +PA SFGPAV S W Sbjct: 195 NPARSFGPAVASGVW 209
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 8.526e-38 Identity = 86/189 (45.50%), Postives = 118/189 (62.43%), Query Frame = 2 Query: 146 EASHPDA--LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 EA PD ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S +AC+LL++ +GG+ T AL +G+ +V E+++TF L++ YA +DP + + TI P+ G IVGAN LAGG F GASM Sbjct: 16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASM 203 HSP 2 Score: 22.7126 bits (47), Expect = 8.526e-38 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 703 DPAVSFGPAVVSWTW 747 +PA SFGPA+ + W Sbjct: 204 NPARSFGPAMATGVW 218
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 8.527e-38 Identity = 86/198 (43.43%), Postives = 114/198 (57.58%), Query Frame = 2 Query: 110 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 +P+ ++ +G GEA P L+A E +FVF G S + K GGA A + +A++A A + V + G ++SGGH+NPAVT VGGHITL RS LY AQL GS +ACLLL+ TGG T AL+ GV V E V TF L+ + AT +DP++ P+ G +VGAN +AGGA GASM Sbjct: 4 LPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASM 200 HSP 2 Score: 22.3274 bits (46), Expect = 8.527e-38 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 703 DPAVSFGPAVVSWTW 747 +PA SFGPA+ + W Sbjct: 201 NPARSFGPALATGEW 215
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.430e-37 Identity = 83/180 (46.11%), Postives = 112/180 (62.22%), Query Frame = 2 Query: 167 LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S AC+LL+F +GG+ T AL G+S +V E+++TF L++ YA +DP + + I P+ G IVGAN LAGG F GASM Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASM 201 HSP 2 Score: 22.3274 bits (46), Expect = 5.430e-37 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 703 DPAVSFGPAVVSWTW 747 +PA SFGPA+ + W Sbjct: 202 NPARSFGPALATGDW 216
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 9.217e-37 Identity = 84/188 (44.68%), Postives = 110/188 (58.51%), Query Frame = 2 Query: 143 GEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 GE ++A LAE +FVF G + MA GA+ P A L ++A A A V V+ G ++SGGH+NPAVT GHIT RS LY AQLL S +AC+LL++ TGG+ T L SG+ +V EI++TF L++ VYAT +DP+ G P+ G IVGAN +AGG F GASM Sbjct: 11 GEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPG-FGPLLTGLIVGANTIAGGNFSGASM 197 HSP 2 Score: 22.7126 bits (47), Expect = 9.217e-37 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 703 DPAVSFGPAVVSWTW 747 +PA SFGPA+ + W Sbjct: 198 NPARSFGPALATGVW 212
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 8.241e-35 Identity = 78/190 (41.05%), Postives = 114/190 (60.00%), Query Frame = 2 Query: 158 PDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG--------TIAPIAIGFIVGANILAGGAFDGASM 703 P AL+A AEFFS +FVF GS ++ LT S + L++ ++A AF LF AV + A++SGGHVNPAVTF +GGHIT+ +I YW +Q+LGS ACL+L + + G ++ ++ + A + E V+TF +VYTV+ A DP+ G G + + +G + GA +LA G+ GASM Sbjct: 14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASM 202 HSP 2 Score: 23.0978 bits (48), Expect = 8.241e-35 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 703 DPAVSFGPAVVS 738 +PA SFGPAVVS Sbjct: 203 NPARSFGPAVVS 214
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 77/181 (42.54%), Postives = 113/181 (62.43%), Query Frame = 2 Query: 161 DALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 +AL+ ++EF S FV A GS M+ KL G S P G++ ++A+A AL +V + N+SGGHVNPAVTF V G I++ ++ YW +Q++ SV+ACL+LK + + ++ ++ + A V E V+ F LVYTV+ TA DP++G + PI IGF+ GAN+LA G F G SM Sbjct: 20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSM 199
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.426e-30 Identity = 73/190 (38.42%), Postives = 107/190 (56.32%), Query Frame = 2 Query: 164 ALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG---------TIAPIAIGFIVGANILAGGAFDGASM 703 +L++ LAEF S +FVF GS ++ LT ++ AG L++ ++A AF LF AV + A++SGGHVNPAVTF +GG I + ++ YW +QLLG+ ACL L + G E ++ ++ + V E V+TF LVYTV+ + G + +A+G GA +LA GA GASM Sbjct: 18 SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASM 207 HSP 2 Score: 23.0978 bits (48), Expect = 5.426e-30 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 703 DPAVSFGPAVVS 738 +PA SFGPAVVS Sbjct: 208 NPARSFGPAVVS 219
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.123e-22 Identity = 67/181 (37.02%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 170 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 +A AEFF+ L +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+I Y +AQLLG+V +L T AL++ GVS A + EI +T V ++AT + + G LG++A +A+GF + L G + GA M Sbjct: 11 RAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGM 183
BLAST of FC931357 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.191e-21 Identity = 67/181 (37.02%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 170 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASM 703 +A AEFF+ L +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+I Y +AQLLG+V +L T AL++ GVS A + EI +T V ++AT + + G LG++A +A+GF + L G + GA M Sbjct: 11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGM 183 The following BLAST results are available for this feature:
BLAST of FC931357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931357 ID=FC931357; Name=FC931357; organism=Citrus clementina; type=EST; length=748bpback to top |