FC931359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4Y1_PANPA (40S ribosomal protein S4, Y isoform 1 OS=Pan paniscus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 7.082e-81 Identity = 98/133 (73.68%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVR D TYPAGFMDVIS+EKTGEHFRLVYDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDTV++D+ TGKI++F+KFD+G + M GG N+GRVGVIT+RERH G Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203 HSP 2 Score: 107.842 bits (268), Expect = 7.082e-81 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLIVF+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4Y1_HUMAN (40S ribosomal protein S4, Y isoform 1 OS=Homo sapiens GN=RPS4Y1 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 7.082e-81 Identity = 98/133 (73.68%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVR D TYPAGFMDVIS+EKTGEHFRLVYDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDTV++D+ TGKI++F+KFD+G + M GG N+GRVGVIT+RERH G Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203 HSP 2 Score: 107.842 bits (268), Expect = 7.082e-81 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLIVF+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4Y1_GORGO (40S ribosomal protein S4, Y isoform 1 OS=Gorilla gorilla gorilla GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 7.082e-81 Identity = 98/133 (73.68%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVR D TYPAGFMDVIS+EKTGEHFRLVYDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDTV++D+ TGKI++F+KFD+G + M GG N+GRVGVIT+RERH G Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203 HSP 2 Score: 107.842 bits (268), Expect = 7.082e-81 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLIVF+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4Y1_MONDO (40S ribosomal protein S4, Y isoform 1 OS=Monodelphis domestica GN=RPS4Y1 PE=2 SV=3) HSP 1 Score: 213.772 bits (543), Expect = 1.572e-80 Identity = 98/133 (73.68%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS+EKTGEHFRLVYDTKGRF VHRI AEEA+YKLCKV+++ + GIP LVTHDARTIRYPDP IKVNDTV++++ TGKI DF+KFD+G + M TGG N+GR+GVIT+RE+H G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 1.572e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_MONDO (40S ribosomal protein S4, X isoform OS=Monodelphis domestica GN=RPS4X PE=2 SV=3) HSP 1 Score: 213.772 bits (543), Expect = 1.572e-80 Identity = 97/133 (72.93%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTDTTYP GFMDVIS+EKTGEHFRLVYDTKGRF VHRI AEEA+YKLCKV++ +G IP LVTHDARTIRYPDP IK+NDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RE+H G Sbjct: 71 KIDGKVRTDTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 1.572e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4Y2_PANTR (40S ribosomal protein S4, Y isoform 2 OS=Pan troglodytes GN=RPS4Y2 PE=2 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 1.572e-80 Identity = 98/133 (73.68%), Postives = 114/133 (85.71%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVR D TYPAGFMDVIS+EKTGEHFRLVYDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDTV++D+ TGKI F+KFD+G V M GG N+GRVGV+T+RERH G Sbjct: 71 KIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPG 203 HSP 2 Score: 107.842 bits (268), Expect = 1.572e-80 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLIVF+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4_ICTPU (40S ribosomal protein S4 OS=Ictalurus punctatus GN=rps4 PE=2 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 2.050e-80 Identity = 98/133 (73.68%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 +VDGKVRTD TYPAGFMDVIS+EKTGE+FRL+YD KGRFTVHRI EEA+YKLCKVK++ +G GIP LVTHDARTIRYPDP IK NDTV++D+ TGKI +F+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 2.050e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4_CRIGR (40S ribosomal protein S4 OS=Cricetulus griseus GN=RPS4 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 2.050e-80 Identity = 96/133 (72.18%), Postives = 118/133 (88.72%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI +EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 2.050e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4_BOVIN (40S ribosomal protein S4 OS=Bos taurus GN=RPS4 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_RAT (40S ribosomal protein S4, X isoform OS=Rattus norvegicus GN=Rps4x PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70 The following BLAST results are available for this feature:
BLAST of FC931359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931359 ID=FC931359; Name=FC931359; organism=Citrus clementina; type=EST; length=679bpback to top |