FC931359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_MOUSE (40S ribosomal protein S4, X isoform OS=Mus musculus GN=Rps4x PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_MESAU (40S ribosomal protein S4, X isoform OS=Mesocricetus auratus GN=RPS4X PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_MACFU (40S ribosomal protein S4, X isoform OS=Macaca fuscata fuscata GN=RPS4X PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_HUMAN (40S ribosomal protein S4, X isoform OS=Homo sapiens GN=RPS4X PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_FELCA (40S ribosomal protein S4, X isoform OS=Felis catus GN=RPS4X PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_CERAE (40S ribosomal protein S4, X isoform OS=Cercopithecus aethiops GN=RPS4X PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 3.487e-80 Identity = 96/133 (72.18%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYPAGFMDVIS++KTGE+FRL+YDTKGRF VHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KFD+G + M TGG N+GR+GVIT+RERH G Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 3.487e-80 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4Y1_PONPY (40S ribosomal protein S4, Y isoform 1 OS=Pongo pygmaeus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 7.739e-80 Identity = 97/133 (72.93%), Postives = 115/133 (86.47%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVR D TYPAGFMDVIS++KTGEHFRLVYDTKGRF V RI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDTV++D+ TGKI++F+KFD+G V M GG N+GRVGVIT+RERH G Sbjct: 71 KIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPG 203 HSP 2 Score: 107.842 bits (268), Expect = 7.739e-80 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLIVF+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4_IXOSC (40S ribosomal protein S4 OS=Ixodes scapularis GN=RpS4 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 7.740e-80 Identity = 103/133 (77.44%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 +VDGKVRTDT YPAGFMDV+++EKTGE FRL+YD KGRFT+HRI EEA+YKLC+VKRVQ+G G+PFL THDARTIRYPDP IKVNDTVKVD+ATGKI D++KFDSG V M TGG N+GRVGVIT RERH G Sbjct: 71 KVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGGHNLGRVGVITSRERHPG 203 HSP 2 Score: 98.9821 bits (245), Expect = 7.740e-80 Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KRL+AP W+LDK+ G +AP+ S GPHKLR+ LPLI+ +RNRLKYAL G EVK I+ QRL+ Sbjct: 3 RGPKKHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLI 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4_CANAL (40S ribosomal protein S4 OS=Candida albicans GN=RPS4 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.009e-79 Identity = 99/134 (73.88%), Postives = 115/134 (85.82%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDGG 677 QV GKVRTDTTYPAGFMDVI+LE T EHFRL YD KG+F VHRI AEEA YKL KVK+VQLGK G+P++VTHD RTIRYPDP I+ NDTVK+D+ATGKI F+KFD+G ++M TGGRN+GRVGVI HRE+ +GG Sbjct: 71 QVVGKVRTDTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAVYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGG 204 HSP 2 Score: 105.531 bits (262), Expect = 1.009e-79 Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KRL+APSHW+L K+SGTYAP+ S GPH LR+ LPL VF+RNRL YAL GREVKAIMMQ+ V Sbjct: 3 RGPKKHLKRLAAPSHWMLXKLSGTYAPRPSAGPHXLRESLPLXVFLRNRLXYALCGREVKAIMMQQHV 70
BLAST of FC931359 vs. ExPASy Swiss-Prot
Match: RS4X_DANRE (40S ribosomal protein S4, X isoform OS=Danio rerio GN=rps4x PE=2 SV=3) HSP 1 Score: 209.534 bits (532), Expect = 2.921e-79 Identity = 93/133 (69.92%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 276 QVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDG 674 ++DGKVRTD TYP GFMDV+S+EKTGE+FRL+YD KGRFTVHRI EEA+YKLCKV+++ +G GIP LVTHDARTIRYPDP IKVNDT+++D+ TGKI DF+KF++G + M TGG N+GR+GVIT+RE+H G Sbjct: 71 KIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPG 203 HSP 2 Score: 107.457 bits (267), Expect = 2.921e-79 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 71 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLV 274 RGP KH KR++AP HW+LDK++G +AP+ S GPHKLR+CLPLI+F+RNRLKYAL G EVK I MQR + Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 70 The following BLAST results are available for this feature:
BLAST of FC931359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931359 ID=FC931359; Name=FC931359; organism=Citrus clementina; type=EST; length=679bpback to top |