FC931361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42 Identity = 85/167 (50.90%), Postives = 116/167 (69.46%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHV 664 Y+FK +IIGD VGKS LL ++ N+F P S TIGVEF T+ ++++ K++K QIWDTAGQERFRAVT +YYRGA GAL+VYDITRR T++ ++ WL + + ++ ML+GNK DLE R+V+ EE + A+ GL F+E+SA NV+ AF + I Q V Sbjct: 7 YIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSV 173
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 7.261e-42 Identity = 84/183 (45.90%), Postives = 126/183 (68.85%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRK--VLNSDSYKAEL 706 +LFK +IIGD+ VGKS LL ++ F P TIGVEF + + ID K +K QIWDTAGQE FR++T +YYRG+ GAL+VYDITRR TF+ ++ WL + ++++++ + +L+GNK D+ES R VS EEG+ A+ GL F+ETSA ++NV+ AF +I + + + +N++S+ +L Sbjct: 4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKL 186
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 9.484e-42 Identity = 77/163 (47.24%), Postives = 117/163 (71.78%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 652 +LFK+++IGDS VGK+ L+ R+A + FN +TIG++F+ +++EI+GK +K Q+WDTAGQERF+ +T+AYYRGA+G ++VYDIT +F++I W+ +K ++ V R+L+GNKCD+E+ R V E+ + LA + F ETSA S NV AF + R+I Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.239e-41 Identity = 80/168 (47.62%), Postives = 124/168 (73.81%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVS 667 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E+DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL E+ ++ V ++LVGNK DL + R VST+ K AE+ G+ F+ETSA ++ NV+ AF ++ +I + ++ Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMA 174
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.239e-41 Identity = 82/163 (50.31%), Postives = 121/163 (74.23%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 652 YLFK+++IGDS+VGKS LL R+A + + +TIGV+F+ +++E DGK +K QIWDTAGQERFR +TS+YYRGA G +IVYD T +F+++ +WL E+ +++ +V ++L+GNK D+ + VSTE G++LA+ G+ F+ETSA DS NV+ AF + EI Sbjct: 7 YLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEI 169
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41 Identity = 76/163 (46.63%), Postives = 117/163 (71.78%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 652 +LFK+++IGDS VGK+ L+ R+A + FN +TIG++F+ ++++I+GK +K Q+WDTAGQERF+ +T+AYYRGA+G ++VYDIT +F++I W+ +K ++ V R+L+GNKCD+E+ R V E+ + LA + F ETSA S NV AF + R+I Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41 Identity = 80/156 (51.28%), Postives = 117/156 (75.00%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAF 631 YLFK+++IGDS+VGKS L R+A + + +TIGV+F+ +++E++GK VK QIWDTAGQERFR +TS+YYRGA G +IVYDIT +F+++ +WLDE+ +++ +V ++LVGNKCDL R V T ++ A+ G+ F+ETSA +S NV+ AF Sbjct: 7 YLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAF 162
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41 Identity = 79/175 (45.14%), Postives = 122/175 (69.71%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRKVLNSD 688 Y+FKI+IIG+S+VGK++ L RYA + F P +T+G++F+ +++ + K +K QIWDTAGQER+R +T+AYYRGA+G +++YDIT +F+++ W ++KT+S +LVGNKCD+E R VS+E G+ LA+ G F E SA D+ NVK FE ++ I + +S + +D Sbjct: 21 YMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTAD 195
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41 Identity = 79/175 (45.14%), Postives = 122/175 (69.71%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRKVLNSD 688 Y+FKI+IIG+S+VGK++ L RYA + F P +T+G++F+ +++ + K +K QIWDTAGQER+R +T+AYYRGA+G +++YDIT +F+++ W ++KT+S +LVGNKCD+E R VS+E G+ LA+ G F E SA D+ NVK FE ++ I + +S + +D Sbjct: 21 YMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTAD 195
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41 Identity = 79/175 (45.14%), Postives = 122/175 (69.71%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRKVLNSD 688 Y+FKI+IIG+S+VGK++ L RYA + F P +T+G++F+ +++ + K +K QIWDTAGQER+R +T+AYYRGA+G +++YDIT +F+++ W ++KT+S +LVGNKCD+E R VS+E G+ LA+ G F E SA D+ NVK FE ++ I + +S + +D Sbjct: 21 YMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTAD 195 The following BLAST results are available for this feature:
BLAST of FC931361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931361 ID=FC931361; Name=FC931361; organism=Citrus clementina; type=EST; length=711bpback to top |