FC931363

Overview
NameFC931363
Unique NameFC931363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_NEUCR (Triosephosphate isomerase OS=Neurospora crassa GN=tpi-1 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.781e-48
Identity = 96/194 (49.48%), Postives = 128/194 (65.98%), Query Frame = 2
Query:   74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK 655
            MARKFFVGGN+K NGT +++K IV  LN A+                     ++L + +  VAAQN + +  GAFTGE+SA  L++L + WVILGHSERR  L ES++F+  K  YAL  G+ VI C GE+ + R++G T+  V  Q  A+A++I++W NVV+AYEP+WAIGTG VAT  QAQEVHA +R WLK
Sbjct:    1 MARKFFVGGNFKMNGTRKDLKAIVDNLNNAQLDPNAEVVIAPPALYLDFVK-QNLQKPNVEVAAQNVFNKPNGAFTGEISATQLLDLGVKWVILGHSERRNELGESDEFIASKTKYALDNGISVIWCCGESKDTRQAGETIKFVENQLAALAKEINDWKNVVIAYEPIWAIGTGLVATKEQAQEVHAAIRSWLK 193          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.577e-47
Identity = 91/140 (65.00%), Postives = 110/140 (78.57%), Query Frame = 2
Query:  230 KSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 649
            +S L     VAAQNC+    GAFTGE+S  ML +L+I WVILGHSERRA+  ES++ + DKVA+AL+ GLKVIAC+GETL++RE+G T AV   QTKAIA+K+ +W NVV+AYEPVWAIGTGK ATP QAQEVH  LRKW
Sbjct:   33 RSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVVAYEPVWAIGTGKTATPEQAQEVHVALRKW 172          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_ANOME (Triosephosphate isomerase (Fragment) OS=Anopheles merus GN=Tpi PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.670e-46
Identity = 89/140 (63.57%), Postives = 109/140 (77.86%), Query Frame = 2
Query:  230 KSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 649
            +SLL     VAAQNC+    GAFTGE+S  ML +L + WVILGHSERRA+  E+++ + +KVA+AL  GLKVIAC+GETL++RE+G T AV   QTKAIA ++ +W NVV+AYEPVWAIGTGK ATP QAQEVHA LRKW
Sbjct:   33 RSLLPETIGVAAQNCYKVAKGAFTGEISPAMLKDLGLGWVILGHSERRAIFGETDELIAEKVAHALGEGLKVIACIGETLQEREAGQTEAVCFRQTKAIAAQVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKW 172          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.181e-46
Identity = 89/140 (63.57%), Postives = 108/140 (77.14%), Query Frame = 2
Query:  230 KSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 649
            +S L     VAAQNC+    GAFTGE+S  ML +L+I WVILGHSERRA+  ES + + DK+ +AL+ GLKVIAC+GETL++RE+  T AV   QTKAIA+K+ +W NVV+AYEPVWAIGTGK ATP QAQEVHA LRKW
Sbjct:   33 RSQLPDTVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESGELIADKIVHALAEGLKVIACIGETLQEREAAKTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKW 172          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_PARBA (Triosephosphate isomerase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=TPI1 PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 1.414e-45
Identity = 94/195 (48.21%), Postives = 124/195 (63.59%), Query Frame = 2
Query:   74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652
            M RKFFVGGN+K NGT++ +  I++ LN A+                     + L      V+AQN + +  GAFTGE+S E L +  I W + GHSERR LL E ++FV  K   A++ GL VI C+GE+LE+RE+G T+ VV  Q  A+AE++S   W+ VV+AYEP+WAIGTGKVAT  QAQEVHA +RKWL
Sbjct:    1 MPRKFFVGGNFKMNGTAKSITHIITNLNSAKLDPSTEIVIAPPAIYLVLA--RQLANGQVAVSAQNVFDKPNGAFTGELSVEQLRDEKITWTLAGHSERRVLLREDDEFVARKTKAAINGGLNVILCIGESLEEREAGKTIDVVTRQLDAVAEEVSPAEWNKVVIAYEPIWAIGTGKVATTEQAQEVHASIRKWL 193          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_ASPOR (Triosephosphate isomerase OS=Aspergillus oryzae GN=tpiA PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.412e-45
Identity = 91/195 (46.67%), Postives = 124/195 (63.59%), Query Frame = 2
Query:   74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652
            M R+FFVGGN+K NGT+E +  I+  LNEA+                      +  +    V++QN + +  GAFTGE+S   L +  IPW I+GHSERR +L E+++F+  KV  A+  G+ VI C+GETLE+RE+  T+ VV +Q  A A++++   W  VV+AYEPVWAIGTGKVAT  QAQEVHA +RKWL
Sbjct:    1 MPRQFFVGGNFKMNGTAESITAIIKNLNEAKLDETTEVVVSPPALYLTLAQQVADEKKKVAVSSQNVFDKPNGAFTGEISVSQLQDAKIPWTIIGHSERRVILKETDEFIARKVKAAIDGGISVIFCIGETLEEREADKTIEVVTKQLNAAAKELTKEQWSKVVIAYEPVWAIGTGKVATTQQAQEVHAAIRKWL 195          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.164e-45
Identity = 89/193 (46.11%), Postives = 122/193 (63.21%), Query Frame = 2
Query:   74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652
            MAR+FFVGGN+K NGT E V KIV  LN+AE                     ++  ++   V+AQNC+ +  GA+TGE+S E + +L   W + GHSERR ++ ES+DF+  K  +AL +GL VI C+GETLE+R++  T+ V A Q  A+A  +S+W  +V+AYEPVWAIGTG  ATP  AQE H  +R+ L
Sbjct:    1 MARQFFVGGNFKMNGTRESVSKIVDGLNKAELPSNVEVVIAPPAPYIALAVNENKQKT-IEVSAQNCFDKASGAYTGEISPEQIKDLGATWTLTGHSERRTIIKESDDFIASKTKFALDQGLSVILCIGETLEERKANVTLDVCARQLDAVARVVSDWSKIVVAYEPVWAIGTGLAATPEDAQETHKAIREHL 192          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_TAESO (Triosephosphate isomerase OS=Taenia solium PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.197e-44
Identity = 92/197 (46.70%), Postives = 118/197 (59.90%), Query Frame = 2
Query:   74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK 655
            M RK FVGGNWK NG+   +     TL +A+                     K+       +AA+NC+    GAFTGE+S EM+ +    WVILGHSERR +  ESN+ +G+KV +AL  GL VI C+GE L +RE+G T  V   Q  AIA+ + +   WD VV+AYEPVWAIGTGK ATPAQAQEVH  +R W++
Sbjct:    1 MTRKLFVGGNWKMNGSYSHINTFFDTLQKADTDPNADIVIGVPACYLKYAQDKA--PKGIKIAAENCYKVGSGAFTGEISTEMIKDCGCEWVILGHSERRHIFGESNELIGEKVKHALDSGLNVIPCIGELLSEREAGKTNDVCFAQMDAIAKNVPSKEAWDKVVIAYEPVWAIGTGKTATPAQAQEVHKVVRDWIR 195          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_EMENI (Triosephosphate isomerase OS=Emericella nidulans GN=tpiA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.197e-44
Identity = 93/196 (47.45%), Postives = 121/196 (61.73%), Query Frame = 2
Query:   74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK 655
            M RKFFVGGN+K NG +E    I+  LN A                      + +   +  VAAQN + +  GAFTGE+S + L   +I W ILGHSERR +L E+++F+  K   A+  GL+VI C+GETLE+RE+  T+ VV  Q  A A+++S   W  VV+AYEPVWAIGTGKVAT  QAQEVH+ +RKWLK
Sbjct:    1 MPRKFFVGGNFKMNGNAESTTSIIKNLNSANLDKSVEVVVSPPALYLLQA--REVANKEIGVAAQNVFDKPNGAFTGEISVQQLREANIDWTILGHSERRVILKETDEFIARKTKAAIEGGLQVIFCIGETLEEREANKTIDVVTRQLNAAAKELSKEQWAKVVIAYEPVWAIGTGKVATTEQAQEVHSAIRKWLK 194          
BLAST of FC931363 vs. ExPASy Swiss-Prot
Match: TPIS_GRAVE (Triosephosphate isomerase, cytosolic (Fragment) OS=Gracilaria verrucosa GN=TPI1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.563e-44
Identity = 91/187 (48.66%), Postives = 119/187 (63.64%), Query Frame = 2
Query:  101 NWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERR--ALLNESNDFVGDKVAYALSRG-LKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652
            NWKCN +  ++ ++VS  N A                      +  LR+DF  +AQN W+ KGGAFTGE+ A M+ ++   WVILGHSERR  A L ES+  +  K AYAL    L VI C+GE LE+RESG T+AV   Q +A+++ IS+W +VV+AYEPVWAIGTGKVATP QA++VH  +R WL
Sbjct:    1 NWKCNLSKADIAELVSAFNAAPPIDAAHVQVVVAPPAVYLDSTRQALRADFDTSAQNAWISKGGAFTGELDAAMVKDVGAEWVILGHSERRHIAQLKESDHTIAMKAAYALQHASLGVIYCIGELLEERESGQTIAVCERQLQALSDAISDWSDVVIAYEPVWAIGTGKVATPEQAEQVHEAVRAWL 187          
The following BLAST results are available for this feature:
BLAST of FC931363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_NEUCR6.781e-4849.48Triosephosphate isomerase OS=Neurospora crassa GN=... [more]
TPIS_AEDTO2.577e-4765.00Triosephosphate isomerase (Fragment) OS=Aedes togo... [more]
TPIS_ANOME1.670e-4663.57Triosephosphate isomerase (Fragment) OS=Anopheles ... [more]
TPIS_CULPI2.181e-4663.57Triosephosphate isomerase (Fragment) OS=Culex pipi... [more]
TPIS_PARBA1.414e-4548.21Triosephosphate isomerase OS=Paracoccidioides bras... [more]
TPIS_ASPOR2.412e-4546.67Triosephosphate isomerase OS=Aspergillus oryzae GN... [more]
TPIS_DEBHA9.164e-4546.11Triosephosphate isomerase OS=Debaryomyces hansenii... [more]
TPIS_TAESO1.197e-4446.70Triosephosphate isomerase OS=Taenia solium PE=2 SV... [more]
TPIS_EMENI1.197e-4447.45Triosephosphate isomerase OS=Emericella nidulans G... [more]
TPIS_GRAVE1.563e-4448.66Triosephosphate isomerase, cytosolic (Fragment) OS... [more]

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Properties
Property NameValue
Genbank descriptionC34104C11EF PostHarvP1 Citrus clementina cDNA clone C34104C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931363 ID=FC931363; Name=FC931363; organism=Citrus clementina; type=EST; length=710bp
GACAACAGGGTGTTGATTTCTCGTATTTTCGTCTCGCTTTCATCGCCAAA
CCAAACAAAATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGGCGGC
AACTGGAAATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTTCTAC
ATTGAATGAAGCTGAAGTTCCTTCTGAGGATGTTGTGGAGGTTGTTGTAA
GCCCTCCGTTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTCTGAT
TTCCATGTTGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTTTTAC
CGGGGAAGTTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGGGTCA
TTCTTGGTCATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAATGATTTT
GTTGGAGATAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCATTGC
TTGTGTTGGAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTGGCTG
TTGTGGCTGAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGAC
AATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGGT
TGCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGGC
TTAAGACAATGTCAGTGCTGAAGTGCAGCATCAACTAGATCATCTACGAG
GTCTGTAATG
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