FC931367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 47/152 (30.92%), Postives = 70/152 (46.05%), Query Frame = 1 Query: 4 LSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPLVSGTIPSTGQLATFEKTSYLGDPLLD--LPDFIENGPHHGHKYPNSNGRTG 453 L L G L ++ L + L N +G +P ++ LPL+ + L N +G IP EFGNI L +L L N SG P NL + ++ +S N +G IPST T + + D L +PDFI+ + ++G G Sbjct: 70 LKRENLQGSLPKELVGLPLLQEIDLSRNYLNGSIPPEWGVLPLVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNF-NGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVG 220
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 1 Query: 13 NQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPLVSGTIPSTGQLATFEKTS--YLGDPLLD--LPDFIENGPHHGHKYPNSNGRTGNNTKLTIILAFLALL 498 + L G L P I KL + L +N +G LP ++ L ++L N SGEIP EFGN L LDL N FSG P NL L KL +S N L +GT+P++ LA + + + D L +P +I+N ++G TG + +L+ L L Sbjct: 110 HNLPGTL-PQIVKLPYLREIDLAYNYINGTLPREWASSNLTFISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKL-TGTLPAS--LARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNL 270
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 1 QLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLP-LIVLNLTRNNFSGEIPSEFGNIK-CLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPL 306 +LS L+G + I +L+N + L FN G +PS LP ++ L L+RN +G IP FG+ + +L LS+N SGP P S N+ + +++++S N L Sbjct: 125 RLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPDLRLSHNQLSGPIPKSLGNI-DFNRIDLSRNKL 227
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 64/214 (29.91%), Postives = 100/214 (46.73%), Query Frame = 1 Query: 1 QLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLI-VLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPL--------------------VSGTIPSTGQLATFEKTSYLGDPLLDLP--DFIENGPHHGHKYPNSNGRTGNNTKLTIILAFLALLMAC-LICGVLSIIIYMLVKRPAEQQ 570 +L G LSG L IG L + FN +G LP F L L+ L L N FSGEIPS + + ++L+ NNF G P + N+ T L+ L + N L ++G+IP L+ KT++LG+ L P NG +G P G G + KL+ A + +++ C ++ VL +I++ L ++ ++Q Sbjct: 69 RLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIPEIKIKLQQFNVSSNQLNGSIPD--PLSGMPKTAFLGNLLCGKPLDACPVNGTGNGTVTP---GGKGKSDKLS-AGAIVGIVIGCFVLLLVLFLIVFCLCRKKKKEQ 276
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 19 LSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLP-LIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLT-ELSKLNISYNPLVSGTIPST 330 L+G + P I KL+N + + L + G +P QL L ++L+ N+ SG IPS +++ L+ L+LS N +GP P SF + ++ L +S+N L SGTIP + Sbjct: 107 LTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKVPSLFLSHNQL-SGTIPKS 211
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 56/170 (32.94%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 7 SGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPLVSGTIPSTGQLATFEKTSYL-GDPLLDLPDFIENGPHHGHKYPNSNGRTGNNTKLTIILAFLALLMACLI 513 S N+ SGEL P+ S+V++ N+ GK+P + L+ L+L N F+GEIP ++ L LDLS N+ +G P NL +L+ N+S+N L SG +P + L + S+L G+P L P G + SN L + L LAL +A + Sbjct: 397 SQNRFSGELPPNFCDSPVLSIVNISHNRLLGKIPELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQNL-KLALFNVSFNGL-SGEVPHS--LVSGLPASFLQGNPELCGP-----GLPNSCSSDRSNFHKKGGKALVLSLICLALAIATFL 557
BLAST of FC931367 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 58/194 (29.90%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 1 QLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQF-DQLP-LIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPLVSGTIPSTGQLATFEKTSYLGDPLLDLPDFIENGPHHGHKYPNSNGRTGNNTKLTIILAFLALLMACLICGVLSIIIYMLVKRPAEQQGY 576 QL QL+GE+ + ++ + L N G +PSQ LP L+ L+L+ N G IP++ K L L LS N SG P+ + L L +L+++ N L SGTIPS +LA F GD DF N G G N + I+ L + L G++ + + + +++GY Sbjct: 78 QLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDL-SGTIPS--ELARFG-----GD------DFSGNNGLCGKPLSRCGALNGRNLSIIIVAGVLG-AVGSLCVGLVIFWWFFIREGSRKKKGY 256 The following BLAST results are available for this feature:
BLAST of FC931367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931367 ID=FC931367; Name=FC931367; organism=Citrus clementina; type=EST; length=741bpback to top |