FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOL5 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOK1 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O1:K1 / APEC GN=cysJ PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SALAR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysJ PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24
Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T  +V      GR   G  S+++      ++ +D     +F+  + NF+LP + + PIIMIG GTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHLTVGVVRYDIE-GRARAGGASSFLA-----DRVDDEGEVRVFIEHNDNFRLPTNPETPIIMIGSGTGIAPFRAFIQQR-AADEAS---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLRERGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SODGM (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Sodalis glossinidius (strain morsitans) GN=cysJ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24
Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS       +H+T  +V  +   GR   G  S ++ + L      D           NF+LP D   P+IMIGPGTG+APFR FLQ+R    EA    G + LFFG  +   D++Y+ E   +V+   L+++ +A+SR+   K YVQ ++ E+  ++W  + +GA +  CG
Sbjct:  387 LTPRLYSIASSQAEVGEEVHITVGVVRYEID-GRPRTGGASGYLADRL----GEDDELRVFIEHNDNFRLPGDPNTPVIMIGPGTGIAPFRAFLQQR----EADGAPGQNWLFFGNPHFTDDFLYQVEWQRYVKERLLTKISLAWSRDQAEKIYVQDRVREQGAEVWRWIQQGAHIYVCG 557          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup A GN=cysJ PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.323e-23
Identity = 69/188 (36.70%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  102 FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV-RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            FA ++  L PR YSISSS       +H+T   V  +   GR   G  S ++ + L  + +       +FV R   F+LP D++ PI+MIG GTG+APFR F+Q+R A    G     + LFFG  +   D++Y+ E   F + G L +   A+SR+   K YVQ K+ E++  +W  L EGA +  CG
Sbjct:  381 FAGLLRPLAPRLYSISSSQAEVGDEVHLTVGAVRFEHE-GRARAGGASGFLADRLEEDGT-----VRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGK----NWLFFGNPHFARDFLYQTEWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCG 558          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: TAH18_SCHPO (Probable NADPH reductase TAH18 OS=Schizosaccharomyces pombe GN=tah18 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.850e-23
Identity = 70/202 (34.65%), Postives = 111/202 (54.95%), Query Frame = 3
Query:   39 QRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF--ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE 638
            +R++LE + EF S + P+     A  P ++ R YSI++    +   + +  ALV  +T      +G+CS W+ + L    S +    P F+      L   +  P+IM+GPGTG+AP R  +QER    LKE       +LLFFGCRN+ MD+++E +   + + G L +L  AFSR+   K+YVQH + E    ++N+L+E
Sbjct:  317 RRTVLETLQEFKSVQIPIEYALDAF-PVIRGRQYSIANRCDNSTGILELAVALVKYQTILKSPRQGICSRWICD-LHENTSFNIDILPGFLN-----LSYQSNKPLIMVGPGTGVAPLRALIQERIYNGLKE-------NLLFFGCRNKSMDFLFEKDWEKYTEEGTL-KLFCAFSRDQEKKKYVQHSIQENGELVYNLLNE 503          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_YEAST (NADPH--cytochrome P450 reductase OS=Saccharomyces cerevisiae GN=NCP1 PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.028e-23
Identity = 74/221 (33.48%), Postives = 112/221 (50.68%), Query Frame = 3
Query:   99 FFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHK-----GLCSTWMKN-------------SLPME-------KSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEA------GTELGPSLLFFGCRNRKMDYIYEDELNNFVQS-GALSQLIVAFSR-EGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            F    VP++ PRYYSISSS       +HVT   + E  P   +       G+ +  ++N             +LP+        K       P+ VR+SNF+LP++   P+IMIGPGTG+APFRGF++ER A  E+         LG  +LF+G RN   D++Y+DE   + +      +++VA SR     K YVQ K+ +    ++ M++ GA +  CG
Sbjct:  428 FLVESVPQMTPRYYSISSSSLSEKQTVHVTS--IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYGSRNTD-DFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCG 645          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ZYMMO (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Zymomonas mobilis GN=cysJ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.028e-23
Identity = 69/189 (36.51%), Postives = 107/189 (56.61%), Query Frame = 3
Query:  102 FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            F +++  L PR YSI+SS     + +H+T  +V  +   G    G  S+++ + L  E  N      +FV  + NF+LP +   P+IMIGPGTG+APFR F+Q+R    +     G + LFFG  +   D++Y+ E   +V+ G L+ + +A+SR+   K YVQ K+ EK+ +IW  + E GA L  CG
Sbjct:  382 FVSLLRPLTPRLYSIASSQAEVENEVHLTVGVVRYEID-GHKRAGGASSFLADRLA-ENGN----LRVFVEHNDNFRLPDNPDAPVIMIGPGTGVAPFRAFMQQR----DNDGAKGKNWLFFGNPHFIEDFLYQVEWQAYVKQGLLTHIDLAWSRDQAKKVYVQDKLREKAAEIWKWIKEDGAYLYVCG 560          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMF (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=cysJ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 68/188 (36.17%), Postives = 100/188 (53.19%), Query Frame = 3
Query:  102 FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV-RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            FA ++  L PR YSISSS       +H+T   V  +   GR   G  S ++ + L  + +       +FV R   F+LP D++ PI+MIG GTG+APFR F+Q+R A    G     + L FG  +   D++Y+ E   F + G L +   A+SR+   K YVQ K+ E++  +W  L EGA +  CG
Sbjct:  381 FAGLLRPLAPRLYSISSSQAEVGDEVHLTVGAVRFEHE-GRARAGGASGFLADRLEEDGT-----VRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGK----NWLIFGNPHFARDFLYQTEWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCG 558          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup B GN=cysJ1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 67/206 (32.52%), Postives = 107/206 (51.94%), Query Frame = 3
Query:   48 LLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV-RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            +++V+  FP++       F  ++  L PR YSISS+       +H+T  +V  +      H+G   T   +    ++  +     +FV R   F+LP D++ PI+MIG GTG+APFR F+Q+R A    G     + L FG  +   D++Y+ E   F + G L +   A+SR+   K YVQ K+ E++  +W  L EGA +  CG
Sbjct:  365 IVDVLHRFPASLT--AEQFIRLLRPLAPRLYSISSAQAEVGDEVHLTVGVVRFE------HEGRARTGGASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGK----NWLIFGNPHFARDFLYQTEWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCG 558          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
CYSJ_ECOL57.017e-2536.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOK17.017e-2536.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALAR2.666e-2436.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SODGM5.940e-2435.56Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIMA1.323e-2336.70Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
TAH18_SCHPO3.850e-2334.65Probable NADPH reductase TAH18 OS=Schizosaccharomy... [more]
NCPR_YEAST5.028e-2333.48NADPH--cytochrome P450 reductase OS=Saccharomyces ... [more]
CYSJ_ZYMMO5.028e-2336.51Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIMF6.567e-2336.17Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIMB6.567e-2332.52Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
back to top