FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS_LYMST (Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.577e-23
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 3
Query:   21 QWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER 413
            +W +    ++LE++ EFPS K P  +    + P LQPRYYSISSS +  P+ +H T A+V  KT  G   VH+G+CS+W+  S P+      +  P F+R + +F LP D  +PIIMIGPG+G+APFR F Q+R
Sbjct:  803 KWRLDLSPNILEILDEFPSLKIPPSLLLTQL-PLLQPRYYSISSSQQKNPNEVHATIAVVRFKTQDGDGPVHEGVCSSWLNRS-PIG-----TVVPCFLRSAPHFHLPEDPSLPIIMIGPGSGIAPFRSFWQQR 929          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIM0 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup C (strain 053442) GN=cysJ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.577e-23
Identity = 68/188 (36.17%), Postives = 100/188 (53.19%), Query Frame = 3
Query:  102 FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV-RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            FA ++  L PR YSISSS       +H+T   V  +   GR   G  S ++ + L  + +       +FV R   F+LP D++ PI+MIG GTG+APFR F+Q+R A    G     + L FG  +   D++Y+ E   F + G L +   A+SR+   K YVQ K+ E++  +W  L EGA +  CG
Sbjct:  381 FAGLLRPLAPRLYSISSSQAEVGDEVHLTVGAVRFEHE-GRARVGGASGFLADRLEEDGT-----VRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGK----NWLIFGNPHFAADFLYQTEWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCG 558          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: PNO_EUGGR (Pyruvate dehydrogenase [NADP+], mitochondrial OS=Euglena gracilis GN=PNO PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.257e-22
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   27 IVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKE-YVQH--KMMEKSWDIWNMLSEGAXLVCCG 662
            I++      ++   FPSA+P L  +   ++P ++PRYYSISS+P   P  +H    +    T +G+   GL  T +++    +  + C      +  +  + P D + P++M   G+GLAPF  FL+ER  L++ G + G   L+FG R  K +++ ++EL   +  G L+ L  AFSR+ P K+ YVQ   KM EK    + ++ +G+ + CCG
Sbjct: 1554 ILSEMYHYADIFHMFPSARPTLQ-YLIEMIPNIKPRYYSISSAPIHTPGEVHSLVLIDTWITLSGKHRTGLTCTMLEHLQAGQVVDGC------IHPTAMEFP-DHEKPVVMCAMGSGLAPFVAFLRERSTLRKQGKKTGNMALYFGNRYEKTEFLMKEELKGHINDGLLT-LRCAFSRDDPKKKVYVQDLIKMDEKMMYDYLVVQKGS-MYCCG 1758          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: TAH18_USTMA (Probable NADPH reductase TAH18 OS=Ustilago maydis GN=TAH18 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 77/234 (32.91%), Postives = 124/234 (52.99%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSP--------RVA--PSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPIKEYVQHKMM--EKSWDIWNMLSE-GAXLVCCG 662
            G DE  ++    +R++ EV+ EF S + PL  + A ++P ++PR +SI+S+P        RV+  P  I ++ A+V  KT   +   GLC+ W+ +SLP+      S  P+ ++     LP  A+ P+I+IGPGTG AP R  + +R  L  +        LF G R R  DY+++ +  +  QS A    L  AFSR+G  K YVQ  ++  + +  +W  ++E  A +V  G
Sbjct:  346 GIDEMYEYAQRPRRTIKEVLDEFKSVQVPLA-YIADVLPWIKPREFSIASAPPANSEREKRVSEEPHAIQLSVAMVKYKTRLRKARTGLCTRWL-SSLPLG-----SRVPVVIKPGYLTLPP-AQAPLILIGPGTGCAPLRSLVIDR--LSNSTLARSEIHLFLGFRYRTKDYLFQHDWQHLQQSYANQFHLHTAFSRDGEAKTYVQDLIVKPDNAHVLWEAITERNAWIVVAG 569          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: TAH18_CRYNE (Probable NADPH reductase TAH18 OS=Cryptococcus neoformans GN=TAH18 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 67/195 (34.36%), Postives = 102/195 (52.31%), Query Frame = 3
Query:    9 DE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQH 593
            DE   +     R+++E +++F   + P+      I+P L+ R +SI+SS    P ++ +  AL+  KT      KGLCS+W+ N LP+         PI +      LP D +VPII++GPGTG+AP R F++ R     A      + L+FGCR+   DY +E E +   + G   Q  VA SR+   + YVQH
Sbjct:  364 DEIHTYATRPSRTIVETLADFRFTRIPMS-HILEILPPLRRRQFSIASSWEDHPGKVQLLVALIEYKTNLKIPRKGLCSSWL-NGLPVGTR-----IPIHIASPTLFLPQDPEVPIILVGPGTGVAPMRAFVEIRVRQGAAKN----TSLYFGCRSSTTDYFFESEWDVHREKGVKIQ--VAASRDQEERIYVQH 545          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: TAH18_GIBZE (Probable NADPH reductase TAH18 OS=Gibberella zeae GN=TAH18 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.759e-21
Identity = 74/225 (32.89%), Postives = 114/225 (50.67%), Query Frame = 3
Query:    9 DE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSS-------PRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            DE   +   S+RS+LEV+ EF S K P    F  I P ++ R +SI++             +RI +  ALV  +T   +  +GLCS ++ N +PM  +   +  P+    S      +A+ P++ I  GTGLAP R  L ER      G    P  LFFG RNR+ DY ++ E +  V  G L+ + +AFSR+   K YVQ +++E++  I  ++ +      CG
Sbjct:  338 DEYFDYATRSRRSILEVLEEFSSVKLPAERLFD-IFPLIRGRDFSIANGGVHQSHPTDENKTRIELLVALVKYRTVLRKPREGLCSRYLDN-IPMNSTLTVTRKPVL---SPIHGAQNAQRPLVAIATGTGLAPIRALLHERLTQPSPG----PMYLFFGNRNREADYFFQQEFDALVTEGQLN-VFLAFSRDQRNKIYVQDRLLEEAKRIEEVIFDNGIFCVCG 552          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: MET10_YEAST (Sulfite reductase [NADPH] flavoprotein component OS=Saccharomyces cerevisiae GN=MET10 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21
Identity = 59/184 (32.07%), Postives = 98/184 (53.26%), Query Frame = 3
Query:   54 EVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMME 605
            ++   FPS +P L      I P L+ R YSI+SS +V P+ +H+   +V      GR   G  S ++ +     +        + V+ S  KLP   K P+IM G GTGLAPF+  ++E+   K+ G E+G   L+ G R+++ +Y+Y +    +  +G ++ +  AFSR+ P K Y+Q ++ E
Sbjct:  792 DIFELFPSVRPSLEELVTIIEP-LKRREYSIASSQKVHPNEVHLLIVVVDWVDNKGRKRYGQASKYISDLAVGSE------LVVSVKPSVMKLPPSPKQPVIMSGLGTGLAPFKAIVEEKLWQKQQGYEIGEVFLYLGSRHKREEYLYGELWEAYKDAGIITHIGAAFSRDQPQKIYIQDRIKE 968          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: MET10_SCHPO (Probable sulfite reductase [NADPH] flavoprotein component OS=Schizosaccharomyces pombe GN=SPCC584.01c PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21
Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 3
Query:   54 EVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWN--MLSEGAXLVCCG 662
            +V+ EF  AK       A IVP ++ R YSISSS +     +H+   +V  K   GR   G CS ++ N    E    C    + V+ S  KLP     PI+M G GTGLAPFR FLQ +   +  G E G  LL+ G R ++ +Y+Y ++   +  +  L+ +  AFSR+ P K Y+Q  +M  + D+    ++ EG     CG
Sbjct:  766 DVLKEFKHAKLTAAQI-AQIVPVIKRREYSISSSQKKHNDSVHLLVVVVGWKDGMGRDRYGQCSHYLSNLKVGEPL--C----VAVKTSVMKLPTSPLKPIVMAGLGTGLAPFRAFLQFKEWQRMQGIESGDILLYLGSRTQREEYLYGEDWEAYHSANLLTHIGQAFSRDQPYKIYIQ-DVMRSTKDMLKKALMDEGGSFYLCG 962          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: TAH18_DEBHA (Probable NADPH reductase TAH18 OS=Debaryomyces hansenii GN=TAH18 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.796e-20
Identity = 70/213 (32.86%), Postives = 112/213 (52.58%), Query Frame = 3
Query:   39 QRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPS---LLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIK-EYVQHKMMEKSWDIWNM-LSEGAXLVCCG 662
            +RS+LE + EF         +   + P ++PR +SI+S P  +P+ + +  A+V  KT   RV +GLC+ W+K+     + ND     I      F+LP     PI+M+ PGTG+AP +       +L E  T LG      LF+GCRN++ DY++ D   +      LS +   FSR+   K +YVQHK+ E+   + ++ L++ A +  CG
Sbjct:  359 RRSILETILEFQQNLTIPVEYILDLFPIIKPRLFSIASRP--SPNSVELIVAVVVYKTILRRVRRGLCTKWIKSL----QDNDRIVFSIHKSNLKFELPTTKYPPILMVSPGTGVAPMK-------SLIEHITSLGIQQHLYLFYGCRNKENDYLFGDLWASLKSQNKLS-IYPCFSRDQDSKIKYVQHKIYEQHELVGDLILNQNAIVFICG 557          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: YKA1_SCHPO (Uncharacterized FAD-binding protein C1783.01 OS=Schizosaccharomyces pombe GN=SPAC1783.01 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.813e-19
Identity = 69/221 (31.22%), Postives = 116/221 (52.49%), Query Frame = 3
Query:   45 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKS-NDCSWA------PIF--VRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELN----NFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLS-EGAXLVCCG 662
            +L +++  FPS  PP+    +A+ P+L PR+YSIS+ P +A  R+ +   +    +P G+   G+C+ ++++ +L   K+ +D S A      P+F  V+Q+ F        P+ +IG G G+APFRGF+Q R A        G   +  GCR++K+D +Y  E N    +       ++ +V  SR G  +EYVQ  +      IW++LS +   +  CG
Sbjct:  320 TLPDILEAFPSCHPPVDHLISAL-PQLMPRWYSISNDPSLANKRLEMAFTVQEYHSPNGQSRTGICTGFLEDLALAFLKARHDGSLANKKFTVPMFRGVQQNPFAKEFHNDGPMCLIGAGVGIAPFRGFVQRRLANAAC---TGKVWIIQGCRDQKLDELYHGEWNTVPGHHKNPKCRAKKLVVESRNGR-REYVQDAVRRHGDVIWDVLSHKNGRIYLCG 535          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
NOS_LYMST8.577e-2344.78Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS ... [more]
CYSJ_NEIM08.577e-2336.17Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
PNO_EUGGR4.257e-2232.09Pyruvate dehydrogenase [NADP+], mitochondrial OS=E... [more]
TAH18_USTMA2.113e-2132.91Probable NADPH reductase TAH18 OS=Ustilago maydis ... [more]
TAH18_CRYNE2.113e-2134.36Probable NADPH reductase TAH18 OS=Cryptococcus neo... [more]
TAH18_GIBZE2.759e-2132.89Probable NADPH reductase TAH18 OS=Gibberella zeae ... [more]
MET10_YEAST4.706e-2132.07Sulfite reductase [NADPH] flavoprotein component O... [more]
MET10_SCHPO4.706e-2134.63Probable sulfite reductase [NADPH] flavoprotein co... [more]
TAH18_DEBHA6.796e-2032.86Probable NADPH reductase TAH18 OS=Debaryomyces han... [more]
YKA1_SCHPO9.813e-1931.22Uncharacterized FAD-binding protein C1783.01 OS=Sc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
back to top