FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS2_RABIT (Nitric oxide synthase, inducible (Fragment) OS=Oryctolagus cuniculus GN=NOS2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.331e-34
Identity = 88/220 (40.00%), Postives = 128/220 (58.18%), Query Frame = 3
Query:   24 WIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSR-EGPIKEYVQHKMMEKSWD-IWNML-SEGAXLVCCG 662
            W  ++  + LEV+ EFPS + P   F  + +P L+PRYYSISSS    PS +H+T A+V  +T  G+  +H G+CSTW+ N  P +        P FVR  S F+LP D   P I+IGPGTG+APFR F Q+R    +  G + G   L FGCR+ + D++Y++E+   V+ G L Q+   +SR  G  K YVQ  + ++  D ++++L  E   L  CG
Sbjct:  242 WKFSNNPTFLEVLEEFPSLRVP-AAFLLSQLPILKPRYYSISSSQDHTPSEVHLTVAVVTYRTRDGQGPLHHGVCSTWINNLKPEDP------VPCFVRSVSGFQLPEDPSQPCILIGPGTGIAPFRSFWQQRLHDSQHRGLKGGRMTLVFGCRHPEEDHLYQEEMQEMVRKGVLFQVHTGYSRLPGKPKVYVQDILQKELADEVFSVLHGEQGHLYVCG 454          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS3_HUMAN (Nitric oxide synthase, endothelial OS=Homo sapiens GN=NOS3 PE=1 SV=3)

HSP 1 Score: 143.28 bits (360), Expect = 1.080e-33
Identity = 79/187 (42.25%), Postives = 113/187 (60.43%), Query Frame = 3
Query:   45 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQ 590
            +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTW+    P +        P F+R + +F+LP D  +P I++GPGTG+APFRGF QER   ++  G +  P  L FGCR  ++D++Y DE+ N  Q G   +++ AFSRE    K YVQ
Sbjct:  910 TLLEVLEQFPSVALPAPLLLTQL-PLLQPRYYSVSSAPSTHPGEIHLTVAVLAYRTQDGLGPLHYGVCSTWLSQLKPGDP------VPCFIRGAPSFRLPPDPSLPCILVGPGTGIAPFRGFWQERLHDIESKGLQPTPMTLVFGCRCSQLDHLYRDEVQNAQQRGVFGRVLTAFSREPDNPKTYVQ 1089          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS3_MOUSE (Nitric oxide synthase, endothelial OS=Mus musculus GN=Nos3 PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33
Identity = 82/195 (42.05%), Postives = 118/195 (60.51%), Query Frame = 3
Query:   21 QWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQ 590
            +W   S  +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTWM       K+ D    P F+R + +F+LP D  +P I++GPGTG+APFRGF Q+R   ++  G +  P  L FGCR  ++D++Y DE+ +  Q G   Q++ AFSR+ G  K YVQ
Sbjct:  901 EWKWFSCPTLLEVLEQFPSVALPAPLILTQL-PLLQPRYYSVSSAPSAHPGEIHLTIAVLAYRTQDGLGPLHYGVCSTWMSQL----KAGDP--VPCFIRGAPSFRLPPDPNLPCILVGPGTGIAPFRGFWQDRLHDIEIKGLQPAPMTLVFGCRCSQLDHLYRDEVLDAQQRGVFGQVLTAFSRDPGSPKTYVQ 1088          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS2_CANFA (Nitric oxide synthase, inducible OS=Canis familiaris GN=NOS2 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.406e-33
Identity = 88/221 (39.82%), Postives = 123/221 (55.66%), Query Frame = 3
Query:   21 QWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSR-EGPIKEYVQHKMMEK-SWDIWNML-SEGAXLVCCG 662
            +W + +  + LEV+ EFPS +   G F  + +P L+PRYYSISSS    P  +H+T A++   T  G+  +H G+CSTW+ N  P +        P FVR + NFKLP D   P I+IGPGTG+APFR F Q+R   +K  G       L FGCR    D++Y +E+    QSG L ++  A+SR  G  K YVQ  + ++ +  +  ML  E   L  CG
Sbjct:  867 KWKLTNSPTFLEVLEEFPSLRVSAG-FLLSQLPILKPRYYSISSSRDCTPMEVHLTVAVLVYPTRDGQGPLHHGVCSTWLSNLKPQDP------VPCFVRSAGNFKLPEDPSRPCILIGPGTGIAPFRSFWQQRLHDIKHKGLRGSRMTLVFGCRRPDEDHLYREEMLEMAQSGVLHEVHTAYSRLPGQPKVYVQDILRQQLASQVLRMLHEEQGHLYVCG 1080          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS3_RAT (Nitric oxide synthase, endothelial OS=Rattus norvegicus GN=Nos3 PE=2 SV=4)

HSP 1 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 80/187 (42.78%), Postives = 115/187 (61.50%), Query Frame = 3
Query:   45 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQ 590
            +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTWM       K+ D    P F+R + +F+LP D  +P I++GPGTG+APFRGF Q+R   ++  G +  P  L FGCR  ++D++Y DE+ +  Q G   Q++ AFSR+ G  K YVQ
Sbjct:  909 TLLEVLEQFPSVALPAPLILTQL-PLLQPRYYSVSSAPSAHPGEIHLTVAVLAYRTQDGLGPLHYGVCSTWMSQL----KAGDP--VPCFIRGAPSFRLPPDPNLPCILVGPGTGIAPFRGFWQDRLHDIEIKGLQPAPMTLVFGCRCSQLDHLYRDEVLDAQQRGVFGQVLTAFSRDPGSPKTYVQ 1088          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS1_RABIT (Nitric oxide synthase, brain OS=Oryctolagus cuniculus GN=NOS1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 86/227 (37.89%), Postives = 128/227 (56.39%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQHKMMEK-SWDIWNMLSE-GAXLVCCG 662
            G  E  +W      +++EV+ EFPS + P  +    +   LQPRYYSISSSP + P  +H+T A+V   T  G   +H G+CS+W+ N +P ++       P FVR + +F+LP + +VP I++GPGT  APFR F Q+R F ++  G    P +L FGCR  K+D+IY +E       G   +L  A+SRE    K+YVQ  + E+ +  ++  L E G  +  CG
Sbjct: 1137 GLQEYEEWKWGKNPTIVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPIHHGVCSSWL-NRIPADEV-----VPCFVRGAPSFRLPRNPQVPCILVGPGTAFAPFRSFWQQRQFDIQHKGMSPCPMVLVFGCRQSKIDHIYREEALQAKNKGVFRELYTAYSREPDKPKKYVQDILQEQLAEQVYRALKEQGGHIYVCG 1356          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS1_HUMAN (Nitric oxide synthase, brain OS=Homo sapiens GN=NOS1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 86/227 (37.89%), Postives = 126/227 (55.51%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQHKMMEK-SWDIWNMLSE-GAXLVCCG 662
            G  E  +W      +++EV+ EFPS + P  +    +   LQPRYYSISSSP + P  +H+T A+V  +T  G   +H G+CS+W+      E        P FVR + +F LP + +VP I++GPGTG+APFR F Q+R F ++  G    P +L FGCR  K+D+IY +E       G   +L  A+SRE    K+YVQ  + E+ +  ++  L E G  +  CG
Sbjct: 1136 GLQEYEEWKWGKNPTIVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYRTRDGEGPIHHGVCSSWLNRIQADEL------VPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDKPKKYVQDILQEQLAESVYRALKEQGGHIYVCG 1355          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 80/216 (37.04%), Postives = 131/216 (60.65%), Query Frame = 3
Query:   27 IVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIFVR--QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSR-EGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            ++A + ++L+ + ++P+ + P   F A ++P L+PRYYSISSSP+V  + + +T  +V     +GR  ++G+ S ++       + N    A  F+R  QS F++P D + P+IM+GPGTG+APFRGF+Q R  LK+ G+ LG +LL+FGCR    D +Y +EL+   Q G L  +   +SR E   K YVQH + + +  +  ++ +GA +  CG
Sbjct:  798 VLAKRLTMLDFLEDYPACEMPFERFLA-LLPSLKPRYYSISSSPKVHANIVSMTVGVVKASAWSGRGEYRGVASNYLA------ELNTGDAAACFIRTPQSGFQMPNDPETPMIMVGPGTGIAPFRGFIQARSVLKKEGSTLGEALLYFGCRRPDHDDLYREELDQAEQDG-LVTIRRCYSRVENEPKGYVQHLLKQDTQKLMTLIEKGAHIYVCG 1005          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS1_RAT (Nitric oxide synthase, brain OS=Rattus norvegicus GN=Nos1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 87/227 (38.33%), Postives = 128/227 (56.39%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQHKMMEK-SWDIWNMLSE-GAXLVCCG 662
            G  E  +W      +++EV+ EFPS + P  +    +   LQPRYYSISSSP + P  +H+T A+V   T  G   VH G+CS+W+       +++D    P FVR + +F LP + +VP I++GPGTG+APFR F Q+R F ++  G    P +L FGCR  K+D+IY +E       G   +L  A+SRE    K+YVQ  + E+ +  ++  L E G  +  CG
Sbjct: 1131 GLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI----QADDV--VPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCG 1350          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS1_MOUSE (Nitric oxide synthase, brain OS=Mus musculus GN=Nos1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 87/227 (38.33%), Postives = 128/227 (56.39%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQHKMMEK-SWDIWNMLSE-GAXLVCCG 662
            G  E  +W      +++EV+ EFPS + P  +    +   LQPRYYSISSSP + P  +H+T A+V   T  G   VH G+CS+W+       +++D    P FVR + +F LP + +VP I++GPGTG+APFR F Q+R F ++  G    P +L FGCR  K+D+IY +E       G   +L  A+SRE    K+YVQ  + E+ +  ++  L E G  +  CG
Sbjct: 1131 GLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI----QADDV--VPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCG 1350          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
NOS2_RABIT6.331e-3440.00Nitric oxide synthase, inducible (Fragment) OS=Ory... [more]
NOS3_HUMAN1.080e-3342.25Nitric oxide synthase, endothelial OS=Homo sapiens... [more]
NOS3_MOUSE1.411e-3342.05Nitric oxide synthase, endothelial OS=Mus musculus... [more]
NOS2_CANFA2.406e-3339.82Nitric oxide synthase, inducible OS=Canis familiar... [more]
NOS3_RAT4.104e-3342.78Nitric oxide synthase, endothelial OS=Rattus norve... [more]
NOS1_RABIT4.104e-3337.89Nitric oxide synthase, brain OS=Oryctolagus cunicu... [more]
NOS1_HUMAN4.104e-3337.89Nitric oxide synthase, brain OS=Homo sapiens GN=NO... [more]
CYPE_BACSU4.104e-3337.04Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
NOS1_RAT7.000e-3338.33Nitric oxide synthase, brain OS=Rattus norvegicus ... [more]
NOS1_MOUSE7.000e-3338.33Nitric oxide synthase, brain OS=Mus musculus GN=No... [more]

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Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
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