FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NDOR1_BOVIN (NADPH-dependent diflavin oxidoreductase 1 (Fragment) OS=Bos taurus GN=NDOR1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 80/216 (37.04%), Postives = 123/216 (56.94%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFP---SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG 641
            G++E  ++    +R+ LEV+ +FP   +A PP   +   ++P ++PR +SI+SS R  PSR+H+  A+V  +T      +GLCS+W+ +   ++ +      P++VR      P    VP+IM+GPGTG+APFR  +QER A  E G     ++LFFGCR R  D+ +E E       G L+ L+ AFSRE   K YVQH++      +W +L  G
Sbjct:  338 GQEELCEYCTRPRRTALEVLCDFPHTAAAVPP--DYLLDLLPLIRPRAFSIASSLRAHPSRLHILVAVVQYQTRLREPRRGLCSSWLAS---LDPAQGPVRVPLWVRSGGLTFPKTPDVPVIMVGPGTGVAPFRAAIQERVAQGETG-----NVLFFGCRRRDQDFYWEAEWEQLQARGCLT-LVTAFSREQEQKVYVQHRLRALGPLVWELLDGG 542          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS3_BOVIN (Nitric oxide synthase, endothelial OS=Bos taurus GN=NOS3 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.194e-32
Identity = 78/187 (41.71%), Postives = 114/187 (60.96%), Query Frame = 3
Query:   45 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQ 590
            +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  +H+T A++  +T  G   +H G+CSTW+       K+ D    P F+R + +F+LP D  VP I++GPGTG+APFRGF QER   ++  G +  P  L FGCR  ++D++Y DE+ +  + G   +++ AFSRE    K YVQ
Sbjct:  912 TLLEVLEQFPSVALPAPLLLTQL-PLLQPRYYSVSSAPNAHPGEVHLTVAVLAYRTQDGLGPLHYGVCSTWLSQL----KTGDP--VPCFIRGAPSFRLPPDPYVPCILVGPGTGIAPFRGFWQERLHDIESKGLQPAPMTLVFGCRCSQLDHLYRDEVQDAQERGVFGRVLTAFSREPDSPKTYVQ 1091          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS2_MOUSE (Nitric oxide synthase, inducible OS=Mus musculus GN=Nos2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.037e-32
Identity = 86/220 (39.09%), Postives = 127/220 (57.73%), Query Frame = 3
Query:   24 WIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSR-EGPIKEYVQHKMMEK-SWDIWNML-SEGAXLVCCG 662
            W  ++  + LEV+ EFPS   P   F  + +P L+PRYYSISSS    PS +H+T A+V  +T  G+  +H G+CSTW++N  P +        P FVR  S F+LP D   P I+IGPGTG+APFR F Q+R    +  G + G   L FGCR+ + D++Y++E+   V+   L Q+   +SR  G  K YVQ  + ++ + ++ ++L  E   L  CG
Sbjct:  865 WKFSNNPTFLEVLEEFPSLHVP-AAFLLSQLPILKPRYYSISSSQDHTPSEVHLTVAVVTYRTRDGQGPLHHGVCSTWIRNLKPQDP------VPCFVRSVSGFQLPEDPSQPCILIGPGTGIAPFRSFWQQRLHDSQHKGLKGGRMSLVFGCRHPEEDHLYQEEMQEMVRKRVLFQVHTGYSRLPGKPKVYVQDILQKQLANEVLSVLHGEQGHLYICG 1077          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS3_PIG (Nitric oxide synthase, endothelial OS=Sus scrofa GN=NOS3 PE=1 SV=4)

HSP 1 Score: 138.272 bits (347), Expect = 3.474e-32
Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 3
Query:   45 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQ 590
            +LLEV+ +FPS   P  +    +   LQPRYYS+SS+P   P  IH T A++  +T  G   +H G+CSTW+    P +        P F+R + +F+LP D  +P I++GPGTG+APFRGF QER   ++  G +  P  L FGCR  ++D++Y DE+ +  Q G   +++ AFSRE    K YVQ
Sbjct:  912 TLLEVLEQFPSVALPTPLLLTQLA-LLQPRYYSVSSAPSTYPGEIHPTVAVLAYRTQDGLGPLHYGVCSTWLGQLKPGDP------VPCFIRAAPSFRLPPDPSLPCILVGPGTGIAPFRGFWQERLHDIESKGLQPAPMTLVFGCRCSQLDHLYRDEVQDAQQRGVFGRVLTAFSREPDSPKTYVQ 1091          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_CANMA (NADPH--cytochrome P450 reductase OS=Candida maltosa GN=NCP1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.926e-32
Identity = 80/208 (38.46%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   99 FFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN------------------SLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQ-SGALSQLIVAFSREGPIKE-YVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            F    VP LQPRYYSISSS       I++T  +  E+   GR   G+ +  +KN                  S P  K N     P+ VR+SNFKLP +   P+I+IGPGTG+AP RGF++ER    + G  +G ++LF+GCRN   D++Y+ E + +    G   ++  AFSR+ P K+ YVQ K+ E S  + ++L+EGA +  CG
Sbjct:  428 FIIENVPHLQPRYYSISSSSLSEKQTINITAVVEVEEEADGRAVTGVVTNLLKNIEIEQNKTGEKPVVHYDLSGPRNKFNKFK-LPVHVRRSNFKLPKNTTTPVILIGPGTGVAPLRGFVRERVQQVKNGVNVGKTVLFYGCRNEHDDFLYKQEWSEYASVLGENFEMFTAFSRQDPSKKVYVQDKIAENSKVVNDLLNEGAIIYVCG 634          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NDOR1_XENLA (NADPH-dependent diflavin oxidoreductase 1 OS=Xenopus laevis GN=ndor1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 75/211 (35.55%), Postives = 120/211 (56.87%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPL-GVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNML 632
            G++E   +    +R++LEV+ +FP     +   F   ++P+++PR +SI+SS    P+ I +  A+V  KT      +GLCSTW+ +  P    +     PI+V++ + K P D   P++M+GPGTG+APFR  +QER A    G     + LFFGCR +  D+ +E E  +    G L+ L  AFSR+   K YVQH++ E S  +W+++
Sbjct:  342 GQEELYSYCNRPRRTILEVLVDFPHTTRCIPATFLLELIPQIRPRAFSIASSMEALPNTIQILMAVVQYKTKLIEPRRGLCSTWLASLPP----HGTERVPIWVKKGSMKFPCDPDTPVVMVGPGTGVAPFRAAIQERVANGRPG-----NCLFFGCRGKSKDFYFEKEWEDLGNRGYLT-LFTAFSRDQEDKIYVQHRIKENSKLLWDLI 542          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS3_CANFA (Nitric oxide synthase, endothelial OS=Canis familiaris GN=NOS3 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 3
Query:   45 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPIKEYVQ 590
            +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTW+       K+ D    P F+R + +F+LP D  +P I++GPGTG+APFRGF Q R   +   G +  P  L FGCR  ++D++Y DE+ +  Q G   +++ AFSRE    K YVQ
Sbjct:  912 TLLEVLEQFPSVALPAPLLLTQL-PLLQPRYYSVSSAPSAHPGEIHLTVAVLAYRTQDGLGPLHYGVCSTWLSQL----KAGDP--VPCFIRGAPSFRLPPDPSLPCILVGPGTGIAPFRGFWQGRLHDIYSKGLQPAPMTLVFGCRCSQLDHLYRDEVQDAQQRGVFGRVLTAFSREPDSPKTYVQ 1091          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_BACSU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Bacillus subtilis GN=cysJ PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.320e-31
Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 3
Query:  102 FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            F +I+ ++  R YSI+SS    P  +H+T   V      GR  KG+CS      L  E+       P++V+ + NFKLP D + PIIM+GPGTG+APFR F+QER   +E G E G + +FFG ++   D++Y+ E  N+++ G L+++ VAFSR+   K YVQH+M+E S +++  L EGA +  CG
Sbjct:  382 FVSILRKMPARLYSIASSLSANPDEVHLTIGAV-RYDAHGRERKGVCSI-----LCAERLQPGDTLPVYVQHNQNFKLPKDPETPIIMVGPGTGVAPFRSFMQER---EETGAE-GKAWMFFGDQHFVTDFLYQTEWQNWLKDGVLTKMDVAFSRDTEEKVYVQHRMLEHSAELFEWLQEGAAVYICG 559          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NDOR1_DANRE (NADPH-dependent diflavin oxidoreductase 1 OS=Danio rerio GN=ndor1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.941e-31
Identity = 75/213 (35.21%), Postives = 125/213 (58.69%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVF-FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE 638
            G+D    +    +R+ LEV+++FP     L +     + P +QPR +SI+SS    P+RI +  A+V  KT   +  KGLCS+W+ +   ++ S    + P++V++ + K P D + P+IM+GPGTG+APFR  +QER A  +       ++LFFGCR+   D+    E    VQ+G +  L+ AFSR+   K YVQH++ E+   +W+++++
Sbjct:  336 GQDTLHSYCNRPRRTALEVLTDFPHTTAELSIGRLLDLFPEIQPRSFSIASSLLEHPNRIQILLAVVKYKTMLVKPRKGLCSSWLAS---LDPSKGDVYVPLWVKKGSLKFPQDPESPVIMVGPGTGVAPFRSAIQERVAQGKMA-----NVLFFGCRSESKDFYCGSEWQEKVQAGQMI-LVTAFSRDQEDKVYVQHRVKEQGKLLWDLIAK 539          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NOS2_HUMAN (Nitric oxide synthase, inducible OS=Homo sapiens GN=NOS2 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.118e-30
Identity = 86/221 (38.91%), Postives = 121/221 (54.75%), Query Frame = 3
Query:   21 QWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSR-EGPIKEYVQHKMMEK-SWDIWNML-SEGAXLVCCG 662
            +W   +  + LEV+ EFPS +   G F  + +P L+PR+YSISSS    P+ IH+T A+V   T  G+  +H G+CSTW+ +  P +        P FVR  S F LP D   P I+IGPGTG+APFR F Q+R    +  G   G   L FGCR    D+IY++E+    Q G L  +  A+SR  G  K YVQ  + ++ + ++  +L  E   L  CG
Sbjct:  870 KWKFTNSPTFLEVLEEFPSLRVSAG-FLLSQLPILKPRFYSISSSRDHTPTEIHLTVAVVTYHTRDGQGPLHHGVCSTWLNSLKPQDP------VPCFVRNASGFHLPEDPSHPCILIGPGTGIAPFRSFWQQRLHDSQHKGVRGGRMTLVFGCRRPDEDHIYQEEMLEMAQKGVLHAVHTAYSRLPGKPKVYVQDILRQQLASEVLRVLHKEPGHLYVCG 1083          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
NDOR1_BOVIN7.000e-3337.04NADPH-dependent diflavin oxidoreductase 1 (Fragmen... [more]
NOS3_BOVIN1.194e-3241.71Nitric oxide synthase, endothelial OS=Bos taurus G... [more]
NOS2_MOUSE2.037e-3239.09Nitric oxide synthase, inducible OS=Mus musculus G... [more]
NOS3_PIG3.474e-3241.18Nitric oxide synthase, endothelial OS=Sus scrofa G... [more]
NCPR_CANMA5.926e-3238.46NADPH--cytochrome P450 reductase OS=Candida maltos... [more]
NDOR1_XENLA7.740e-3235.55NADPH-dependent diflavin oxidoreductase 1 OS=Xenop... [more]
NOS3_CANFA1.011e-3141.71Nitric oxide synthase, endothelial OS=Canis famili... [more]
CYSJ_BACSU1.320e-3140.96Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NDOR1_DANRE2.941e-3135.21NADPH-dependent diflavin oxidoreductase 1 OS=Danio... [more]
NOS2_HUMAN1.118e-3038.91Nitric oxide synthase, inducible OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
back to top