FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.740e-27
Identity = 71/181 (39.23%), Postives = 108/181 (59.67%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T ALV E    G+   G  S ++ ++       + +   ++V  + +F+LP D + P+IMIGPGTG+APFR F+QER A    G E G S LFFG  + + D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA L  CG
Sbjct:  389 LTPRLYSIASSQSEVDTEVHLTVALV-EDEHQGQARFGGASHFLASA------EEGAEVKVYVEPNKHFRLPEDPQTPVIMIGPGTGVAPFRAFMQERVA---QGAE-GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICG 558          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESM (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-4) GN=cysJ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.740e-27
Identity = 71/181 (39.23%), Postives = 108/181 (59.67%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T ALV E    G+   G  S ++ ++       + +   ++V  + +F+LP D + P+IMIGPGTG+APFR F+QER A    G E G S LFFG  + + D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA L  CG
Sbjct:  389 LTPRLYSIASSQSEVDTEVHLTVALV-EDEHQGQARFGGASHFLASA------EEGAEVKVYVEPNKHFRLPEDPQTPVIMIGPGTGVAPFRAFMQERVA---QGAE-GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICG 558          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain ANA-3) GN=cysJ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.740e-27
Identity = 71/181 (39.23%), Postives = 108/181 (59.67%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T ALV E    G+   G  S ++ ++       + +   ++V  + +F+LP D + P+IMIGPGTG+APFR F+QER A    G E G S LFFG  + + D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA L  CG
Sbjct:  389 LTPRLYSIASSQSEVDTEVHLTVALV-EDEHQGQARFGGASHFLASA------EEGAEVKVYVEPNKHFRLPEDPQTPVIMIGPGTGVAPFRAFMQERVA---QGAE-GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICG 558          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ENTS8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=cysJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T  +V      GRV  G  S+++ + L  +     S   +F+  + NF+LPA  + P+IMIGPGTG+APFR F+Q+R    EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  L EGA L  CG
Sbjct:  384 LTPRLYSIASSQAEVENEVHITVGVVRFDIE-GRVRAGGASSYLADRLEED-----SEVRVFIEHNDNFRLPATPETPVIMIGPGTGIAPFRAFMQQR----EADGATGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLTRIDLAWSRDQDHKIYVQDKIREQGAELWRWLQEGAHLYVCG 554          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_MANSM (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Mannheimia succiniciproducens (strain MBEL55E) GN=cysJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26
Identity = 75/206 (36.41%), Postives = 112/206 (54.37%), Query Frame = 3
Query:   48 LLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            +++V+ +FP+        FA ++  L PR YSISSSP      +H++  +V  +      H+G   T + +    ++  +     IFV  + NF+LP D   PIIMIG GTG+APFR FLQ+R    +A    G + L FG ++   D++Y+ E   FV+ G L +   A+SR+   K YVQ K+ EKS  +W  L EGA +  CG
Sbjct:  358 IVDVLHDFPAKISAQQ--FADLLRPLTPRLYSISSSPEEVGEEVHLSVGVVRFE------HEGRARTGVASGFLADRVEEDGEVKIFVEPNDNFRLPQDKSKPIIMIGSGTGIAPFRAFLQQR----QAEEAEGKNWLIFGNQHFATDFLYQAEWQQFVKDGYLHKYDFAWSRDQAEKIYVQDKIREKSTALWQWLQEGAHVYVCG 551          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: PNO_CRYPV (Pyruvate dehydrogenase [NADP+] OS=Cryptosporidium parvum GN=PFOR PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 78/224 (34.82%), Postives = 120/224 (53.57%), Query Frame = 3
Query:   51 LEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPR-VAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPM----EKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEA-GTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREG-------------PIKEYVQHKMMEKSWDIW-NMLSEGAXLVCCG 662
            L+V   F SA+P L      IVP ++ R YSI+S  + V   +I +   +V  K  +G +  G C+ ++ N LP+     K +     P  ++ S F LP D + P+IM   GTG+APFR F+Q +  +++    E+GP +L+FGCR    DY+Y +EL N+V+ G ++ L +AFSR+                K YVQH M+E S +I+ NM+ +      CG
Sbjct: 1662 LDVFKMFESARPTLAQLLD-IVPFIKSRSYSIASCNKFVNGEKIELCVGIVDWKLESGEIRYGQCTGFL-NRLPILDSESKIDSIPRLPSNIKASAFNLPFDYRSPVIMACMGTGIAPFRAFVQNKKYIRDVLKEEIGPVILYFGCRYYDNDYLYREELENYVKEGVITSLNIAFSRDPKGYKTSNCENIRYAQKMYVQHLMLENSQEIYENMIEKCGYFYLCG 1883          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysJ PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26
Identity = 68/186 (36.56%), Postives = 110/186 (59.14%), Query Frame = 3
Query:  108 AIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            +I+  L+PR YSISSS       +H+T  +V +K  +G +H G  S+++   L ++ S       IFV + SNF+LP +  VPIIMIG GTG+APFR F+Q+R    +     G + +FFG  N   D++Y+ E   +++   L+++ +A+SR+   K YVQ K+ E   ++W  +++GA +  CG
Sbjct:  381 SILRPLKPRLYSISSSQSEMNDEVHITVGVV-KKQISGTIHLGGSSSYLSQFLKIDDS-----VKIFVEEKSNFRLPENKDVPIIMIGSGTGIAPFRAFIQQR----DNDKATGKNWIFFGNPNFTEDFLYQLEWQKYLKKKLLTKMSLAWSRDQKEKIYVQDKIRENGKELWEWVNQGAQIYVCG 556          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_BLOFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Blochmannia floridanus GN=cysJ PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 69/185 (37.30%), Postives = 110/185 (59.46%), Query Frame = 3
Query:  111 IVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            I+  ++PR+YSI+S+       IH+T ++V   T  GR+  G  S+++     +++  D     IFV  + NF+LP D  V IIMIG GTG+APFR F+Q+R AL +A   LG + LFFG      D++Y+ E   + +SG L+++  A+SR+   K YVQ K++    ++W+ + +GA +  CG
Sbjct:  390 ILRPMRPRFYSIASAQSEVGEEIHITVSVV-RYTINGRIRSGGASSYL-----VDRVQDHDEIRIFVESNDNFRLPKDPNVSIIMIGAGTGIAPFRSFMQQR-ALDKA---LGKNWLFFGNLKFTDDFLYQIEWKTYFKSGILNKIDTAWSRDQDYKVYVQDKLLSNGLELWDWIQKGAYIYVCG 564          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis GN=cysJ PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 65/181 (35.91%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T  +V      GR   G  S ++ + L ++         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R    E     G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA +  CG
Sbjct:  402 LTPRLYSIASSQAETENEVHITVGVVRYDID-GRARSGGASGYLADRLEVDGD-----IRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR----EVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCG 572          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis (strain Pestoides F) GN=cysJ PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 65/181 (35.91%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +H+T  +V      GR   G  S ++ + L ++         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R    E     G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA +  CG
Sbjct:  396 LTPRLYSIASSQAETENEVHITVGVVRYDID-GRARSGGASGYLADRLEVDGD-----IRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR----EVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCG 566          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
CYSJ_SHESR5.740e-2739.23Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESM5.740e-2739.23Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESA5.740e-2739.23Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ENTS87.497e-2738.67Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_MANSM1.279e-2636.41Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
PNO_CRYPV2.849e-2634.82Pyruvate dehydrogenase [NADP+] OS=Cryptosporidium ... [more]
CYSJ_BUCAP3.720e-2636.56Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BLOFL4.859e-2637.30Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPS6.346e-2635.91Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPP6.346e-2635.91Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
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