FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---DGAE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO57 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O157:H7 GN=cysJ PE=3 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQEEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHISS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella sonnei (strain Ss046) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri GN=cysJ PE=3 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANLETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIF8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri serotype 5b (strain 8401) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANLETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIDS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRTRAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIBS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella boydii serotype 4 (strain Sb227) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SALCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella choleraesuis GN=cysJ PE=3 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+S+     S +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASAQAEVESEVHVTVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---EGAE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGMLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ENT38 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Enterobacter sp. (strain 638) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 69/181 (38.12%), Postives = 106/181 (58.56%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     S +H+T   V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A +EA    G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  ++ GA L  CG
Sbjct:  385 LTPRLYSIASSQAEVESEVHITVGAVRFDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AAEEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKQKIYVQDKLREQGAELWAWINNGAHLYVCG 555
[Close]
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain K12) GN=cysJ PE=1 SV=4)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
CYSJ_SALTI1.414e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO571.414e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHISS1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIFL1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIF81.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIDS1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIBS1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALCH1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ENT381.846e-2538.12Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOLI1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
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