FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLC (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOHS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O9:H4 (strain HS) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO24 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 69/181 (38.12%), Postives = 107/181 (59.12%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSISSS     + IH+T  +V +K  +G V+ G  S ++  SL   KS+D     IF++ + NF+LP +   PIIMI  GTG+APFR F+Q+R    +     G + LFFG  N   D++Y+ E   +++ G ++ + +A+S++   K YVQ ++ E S +IW+ + EGA +  CG
Sbjct:  385 LTPRLYSISSSQEEIDNEIHITVGVV-KKLISGHVYLGGASGYLSQSL---KSDDI--IKIFIQTNDNFRLPINKNTPIIMISSGTGIAPFRAFMQQR----DNDNADGKNWLFFGNPNFTEDFLYQVEWQKYIKKGLITNMNLAWSQDQKNKIYVQDRIRENSQEIWSWIEEGAQIYVCG 555          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_PHACH (NADPH--cytochrome P450 reductase OS=Phanerochaete chrysosporium GN=CPR PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 85/250 (34.00%), Postives = 117/250 (46.80%), Query Frame = 3
Query:   81 KPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALV-YEKTPTGRV--------------------HKGLCSTWMKNSLPME-------------------KSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFAL---------KEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQS-GALSQLIVAFSREGPIKE-----YVQHKMMEKSWDIWNMLSEGAXLV-CCG 662
            K P  +  ++I PRLQPRYYSISSSP++ P+ IH T  ++ Y+     RV                    H    +T + +  P E                   K  D    PI VR+S F+LP + K P+IMIGPGTG+APFRGF+QER A+          E   + GP  L++GCR    D++Y+DE   + +       +  AFSRE P K      YVQ  + E +  I + +  G   V  CG
Sbjct:  440 KIPFDIIVSSI-PRLQPRYYSISSSPKLYPNAIHATVVVLKYKSEKAPRVEERWIYGVGSNFLLNLKYASHHDKAATLVSDDSPSEPSIVSHYPTYSIEGPRGAYKQGDVVKVPIHVRRSTFRLPTNPKSPVIMIGPGTGVAPFRGFVQERVAMARRTIEKHGPEGLADWGPIRLYYGCRRSDQDFLYKDEWPEYAKELHGKFIMRCAFSREPPYKPDGSKIYVQDLIWEDAEQIADAILNGKGYVYICG 688          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_KLEP7 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 66/181 (36.46%), Postives = 109/181 (60.22%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     S +HVT  +V  +   GR   G  S+++ + +  +         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G + G + LFFG  +   D++Y+ E  ++V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVESEVHVTVGVVRYEIE-GRARAGGASSFLADRVEEDGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAA---DGAQ-GKNWLFFGNPHFTEDFLYQVEWQSYVKEGLLTRIDLAWSRDQQQKIYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi A GN=cysJ PE=3 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+S+     S +H+T  +V      GR   G  S+++   +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLAGRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---DGAE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_BAUCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=cysJ PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 64/181 (35.36%), Postives = 108/181 (59.67%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS       +H+T ++V  +   G++  G  S+++   L   +        +F+  + NF+LP +    IIMIG GTG+APFRGF+Q+R    EA T  G + LFFG ++   D++Y+ E   ++++G L+++ VA+S++   K YVQ +++EK  ++WN + +GA +  CG
Sbjct:  379 LMPRLYSIASSQAEVGDEVHLTVSVVRYEID-GKIRTGGASSYLAYRLQESEP-----IRVFIEHNDNFRLPNNPNTAIIMIGSGTGIAPFRGFMQQR----EATTAKGKNWLFFGNQHLTDDFLYQVEWQRYIKNGLLNKIDVAWSQDQNKKIYVQDRLLEKGIELWNWIQDGAHIYVCG 549          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOUT (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain UTI89 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOL6 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O6 GN=cysJ PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  123 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA +  CG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCG 553          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
CYSJ_ECOLC1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOHS1.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO241.846e-2537.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BUCAI1.846e-2538.12Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_PHACH2.412e-2534.00NADPH--cytochrome P450 reductase OS=Phanerochaete ... [more]
CYSJ_KLEP72.412e-2536.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPA3.150e-2536.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BAUCH3.150e-2535.36Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOUT7.017e-2536.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOL67.017e-2536.46Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
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