FC931375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.216e-74 Identity = 129/179 (72.07%), Postives = 146/179 (81.56%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C C PG+ I +TATNFCPPN+ PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+K T RNW Sbjct: 22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNW 198
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.216e-74 Identity = 129/179 (72.07%), Postives = 146/179 (81.56%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C C PG+ I +TATNFCPPN+ PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+K T RNW Sbjct: 22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNW 198
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.084e-73 Identity = 125/177 (70.62%), Postives = 145/177 (81.92%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 W +A ATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN G SCGACF++KC DP+WC G I +T TNFCPPNFAQ ++ GGWCNPP+ HFDLA P+FL++AQY+AG+VPV YRRV CR++GGIRFTING YFNLVL+TNVAGAGD++ VS+K T RNW Sbjct: 29 WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGT--ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNW 203
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 6.065e-73 Identity = 130/184 (70.65%), Postives = 148/184 (80.43%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC---GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPTPMAEH--DRNW 695 GG W SAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE++C GG C PG+ +++TATNFCPPN A PSD+GGWCNPPR HFD++ P+F ++A ++AGIVPVSYRRV C+K+GGIRFTING YFNLVLVTNV GAGD+ V+VK A RNW Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGS--VVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNW 242
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.035e-72 Identity = 126/180 (70.00%), Postives = 141/180 (78.33%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPTPMA--EHDRNW 695 G WQ HATFYGG DASGTMGGACGYGNLY QGYG NTAALSTALFNNGL+CGAC+E+KC DP+WC I +TATNFCPPN +DNGGWCNPP HFDLA P FL++AQYRAGIVPVS+RRVPC K+GGIRFTING YFNLVL++NV GAGD+ VS+K + RNW Sbjct: 28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCL--GSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNW 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 271.166 bits (692), Expect = 3.931e-72 Identity = 123/166 (74.10%), Postives = 142/166 (85.54%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 G W+ HATFYGG+DASGTMGGACGYGNL+SQGYG+ TAALSTALFN+G CGACFEL+C DP+WC PG+ I+++ATNFCPPNFA +DNGGWCNPP HFDLA P FL++AQYRAGIVPV++RRVPC K GGIRFTING YF+LVL+TNV GAGDI VS+K Sbjct: 30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGS--IIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLK 193
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 9.683e-71 Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQW-CNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 G WQ HATFYGG DASGTMGGACGYGNLYSQGYG +TAALSTALFN GLSCG+C+EL+C GD + C PG + +TATNFCPPN+A PSD GGWCNPPR HFDLA P FL++A++ AGIVPVS+RRV C ++GG+RFT+NG YFNLVLVTNV GAGD+ ++VK Sbjct: 26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVK 192
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.672e-68 Identity = 120/176 (68.18%), Postives = 140/176 (79.55%), Query Frame = 3 Query: 138 KIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 KI V AG W AHATFYGGSDASGTMGGACGYGNLY+ GY NTAALSTALFN+G SCG C+++ C PQWC G +I ITATNFCPPNFAQ SDNGGWCNPPRPHFD+A P FL +A+Y+AGIVP+ Y++V CR+ GG+RFTING YF LVL++NVAG G+I +V +K Sbjct: 20 KISSVSAG--WLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGK-SITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIK 192
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 8.482e-67 Identity = 123/172 (71.51%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 150 VFAGGP--WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 V AGG W S ATFYGGSDASGTMGGACGYGNLYS GYG +TAALSTALFNNG SCGACFE++CGG C G A+ TATN CPPN+A D GGWCNPPRPHFD+A P F ++AQ RAG+VPV YRRV C K+GGIRFTI G YFNLVLVTNV GAGD+ VSVK Sbjct: 19 VAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAV--TATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVK 187
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 1.447e-66 Identity = 123/189 (65.08%), Postives = 138/189 (73.02%), Query Frame = 3 Query: 150 VFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPT-----PMAEHDRNW 695 V A WQ AHATFYGG+DASGTMGGACGYGNLYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YF LVLVTNVA AG I + V PMA RNW Sbjct: 33 VAAPTQWQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMA---RNW 217 The following BLAST results are available for this feature:
BLAST of FC931375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931375 ID=FC931375; Name=FC931375; organism=Citrus clementina; type=EST; length=715bpback to top |