FC931375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.654e-65 Identity = 111/171 (64.91%), Postives = 133/171 (77.78%), Query Frame = 3 Query: 153 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 FA W ATFYGGSDASGTMGGACGYGNLY+QGYG TAALSTALF++G SCG C+ L C DP+WC G ++ +TATNFCPPN+A PSD+GGWCNPPRPHFD+A P + ++ YR GIVPV++RRVPCR+RGG+RFT+ G YF LVLVTNVA AG + + V+ Sbjct: 29 FAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAG-ASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVR 198
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.654e-65 Identity = 116/178 (65.17%), Postives = 134/178 (75.28%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPTPMAEHDRNW 695 W AHATFYGG+DASGTMGGACGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + V M + +W Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDV-----MGSNSTDW 223
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.654e-65 Identity = 114/178 (64.04%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPTPMAEHDRNW 695 WQ AHATFYGG+DASGTMGG CGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + + M + +W Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI-----MGSNSTDW 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.939e-65 Identity = 119/179 (66.48%), Postives = 137/179 (76.54%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 GPW +AHATFYGG DASGTMGGACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFEL C DPQWC G +I++TATNFCPP GG C+PP HFDL+ P++ K+A Y++GI+PV YRRV C++ GGIRFTING YFNLVLVTNV GAGD+ VS+K T RNW Sbjct: 36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNW 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 1.037e-64 Identity = 113/173 (65.32%), Postives = 132/173 (76.30%), Query Frame = 3 Query: 147 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 G W AHATFYGG+DASGTMGGACGYGNLY+QGYG TAALSTALFN+GL+CG C++L C D WC PG ++ ITATNFCPPN+ PSD+GGWCNPPRPHFD+A P + K+ YR GI+PV Y+RVPC K+GG+RFTING YF LVL+TNV AG I + VK Sbjct: 27 GALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPG-VSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVK 198
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.769e-64 Identity = 113/174 (64.94%), Postives = 136/174 (78.16%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG----DPQWCNP--GNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 A G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFEL+CGG D + C P +I++TAT+ CP N A P D GGWCNPP HFDL+ P FL++A++++GIVPVSYRRV CR++GG+RFTING YFNLVLV+NV GAGD+ V+VK Sbjct: 26 AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVK 199
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 2.310e-64 Identity = 113/178 (63.48%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPTPMAEHDRNW 695 W AHATFYGG+DASGTMGGACGY +LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + +TATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + + M + +W Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI-----MGSNSTDW 221
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.431e-63 Identity = 107/171 (62.57%), Postives = 128/171 (74.85%), Query Frame = 3 Query: 147 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 G F GPW+ AHATFYGG D SGT+ GACGY + +GYGV T A+ST LF G CGAC+E+KC P C G +++TATN CPPN Q +DNGGWCNPPR HFDL+MP FL++AQ +AGIVP+SYRRVPC K GGIR+TI G YFNLV+V+NV GAGD+ +SVK Sbjct: 35 GKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVK 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.655e-62 Identity = 120/210 (57.14%), Postives = 139/210 (66.19%), Query Frame = 3 Query: 72 MALFRMLCXXXXXXXXXXTANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG-DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 MA RML TA+A W A ATFYGGSDASGTMGGACGYG+LY GYG TAALSTALFN G SCGACF + C QWC PG +I +TATNFCPPN+A D GGWCNPPR HFD++ P + +A YRAGIVPV+YRRVPC++ GGIRF +NG YF LVLVTNV G+G + ++ +K T RNW Sbjct: 1 MAAARMLVLLASLCALLLTASA--------AKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNW 201
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 2.824e-62 Identity = 111/179 (62.01%), Postives = 134/179 (74.86%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVP-TPMAEHDRNW 695 W S ATFYGGSDASGTMGGACGYGNLY GYG NTAALS+ALFN+G SCG C+++ C +P+WC G + IT TN CPPN+A S++GGWCNPPR HFD+A P +L++ Y+AGIVPV Y+RVPC K+GG+RFT+ GF YF LVL++NVAG+G I V VK P T RNW Sbjct: 32 WSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNW 209 The following BLAST results are available for this feature:
BLAST of FC931375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931375 ID=FC931375; Name=FC931375; organism=Citrus clementina; type=EST; length=715bpback to top |