FC931375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 8.216e-62 Identity = 111/183 (60.66%), Postives = 134/183 (73.22%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 A G W S ATFYGG DASGTMGGACGYGNLY+QGYGV AALSTALFN G SCG C+ + C P+WC G A+ ITATN CPPN+A +D+GGWCNPPRPHFD++ P + + YRAGIVPV Y++V C ++GG+RFT++GF YF LVL+TNVAG+G + +SVK T RNW Sbjct: 23 AAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNW 204
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.390e-61 Identity = 113/184 (61.41%), Postives = 131/184 (71.20%), Query Frame = 3 Query: 153 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 F W A ATFYGGSDASGTMGGACGYG+LYS GYG NTAALST LFN+G SCG C+ + C D ++C G ++ ITATN CPPN+A P+D GGWCNPPR HFD+A P +LK+ Y GIVPV Y+RVPC K+GG+RFTING YF LVLV+NV G G I VS+K T RNW Sbjct: 29 FTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNW 211
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 3.122e-61 Identity = 109/179 (60.89%), Postives = 135/179 (75.42%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 W ATFYGG+DASGTMGGACGYGNLY+ GYG NTAALS+ LFN+G SCG C+ + C PQWC G A+ ITATN CPPN+A PS++GGWCNPPRPHFD+A P +L++ Y+AGI+PV Y++V C ++GGIRFT+ GF +F LVLV+NVAG+G + VSVK T +RNW Sbjct: 27 WNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAG-AAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNW 204
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 4.078e-61 Identity = 111/193 (57.51%), Postives = 135/193 (69.95%), Query Frame = 3 Query: 135 AKIPGVFAGGP---WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 A + AGG W A ATFYGGSD SGTMGGACGYGNLY QGYGV+ AALS ALFN+G SCG C+ + C PQWC G A+ +TATN CPPN+A PSD GGWCNPPRPHFD++ P + ++ Y+AGIVPV Y+RV C ++GG+RFT+ G YF LVL+TNVAG+G + +K T + RNW Sbjct: 14 AVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGT-AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNW 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 9.084e-61 Identity = 109/183 (59.56%), Postives = 132/183 (72.13%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 A W A ATFYGG+D SGTMGGACGYGNLY QGYG+ AALSTALFN+G +CG C+ + C D +WC P A+ +TATN CPPN+A PSD GGWCNPPR HFD++ P + ++ YRAGIVPV YRRV C +RGG+RFT+ GF +F LVLV NVAG+G + VSV+ T + RNW Sbjct: 23 AADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRG-AVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNW 204
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 2.643e-60 Identity = 106/177 (59.89%), Postives = 132/177 (74.58%), Query Frame = 3 Query: 171 QSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 QSA ATFYGG D SGTMGGACGYGNLY+ GYG+ AALS+ALFN+G CGAC+ + C +WC PG +I ITATN CPPN+A PS++GGWCNPPR HFD++ P + +A Y+AGIVPV+Y+RVPC++ GGIRF I+G YF LV VTNV G+G + ++S+K T RNW Sbjct: 29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNW 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.508e-60 Identity = 105/169 (62.13%), Postives = 125/169 (73.96%), Query Frame = 3 Query: 153 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 659 +AG PW++A ATFYG S TMGGACGYGN+Y GYGV T ALSTALFN G +CG CF+LKC P C G+PA ++TATN CPPN+ Q S+NGGWCNPPR HFDL P F+K+A ++AGI+PVSYRRV C+K GGIRF G Y+ LV V NV G GDI ++VK Sbjct: 26 YAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVK 193
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.690e-60 Identity = 107/178 (60.11%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 W A ATFYGGSD +GTMGGACGYGNLY+ GYG+N AALS+ALFN+G CGAC+ + C WC PG +I ITATN CPPN+A+ SD GGWCNPPR HFD++ P + +A Y+AGIVPV+++RVPC+K GGIRFTI+G YF LV V NV G+G + +VS+K T RNW Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNW 199
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.713e-59 Identity = 104/176 (59.09%), Postives = 132/176 (75.00%), Query Frame = 3 Query: 174 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 S ATFYGGSDASGTMGGACGYGNLYS GYG NTAALS+ALFN+G +CG C+++ C + +WC G ++ ITATN CPP++++PS++GGWCNPPR HFD+A P + ++ YR GIVPV+++RV C ++GG+RFTING YF LVL+TNV G G I V +K T RNW Sbjct: 26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNW 200
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.237e-59 Identity = 109/177 (61.58%), Postives = 129/177 (72.88%), Query Frame = 3 Query: 174 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-VPTPMAEHDRNW 695 + HATFYGGSDASGTMGGACGYG+LYS GYG TAALSTALFN+G SCG C+ + C D +WC G +++ITATNFCPPNFA P++NGGWCNPP HFD+A P + K+ YR GIVPV ++RV C K+GG+RF ING YF LV + NV GAG I VS+K T RNW Sbjct: 28 NGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKG-ASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNW 203 The following BLAST results are available for this feature:
BLAST of FC931375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931375 ID=FC931375; Name=FC931375; organism=Citrus clementina; type=EST; length=715bpback to top |