FC931375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFR--YFNLVLVTNVAGAGDIVRVSV 656 G W S AT+YGG G+ GGACGY + Q + AA +LF NG CG+C+++KC G+ + C+ G P + + T+ CP GG C HFD++ F +A AG++ + Y+RVPCR + F ++ Y+ +LV G GD+ V + Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACS-GRP-VTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHI 205
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-16 Identity = 61/176 (34.66%), Postives = 93/176 (52.84%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QYR-AGIVPVSYRRVPCRKRGGIRFTI-----NGFRYFNLVLVTNVAGAGDIVRVSV 656 W + AT+YG ++ +G+ GGACGY G ++ + AA S +++ +GL CG+C+++KC G+ C+ GNP + + T+ CP GG C HFDL+ F +A Q R AG++ + Y RVPC GG++ T + YF VLV G GD+ V + Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CS-GNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYF-AVLVKYENGDGDLSGVEL 198
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15 Identity = 71/204 (34.80%), Postives = 96/204 (47.06%), Query Frame = 3 Query: 144 PGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG-GIRFTI----NGFRYFNLVLVTNVAGAGDIVRVSVKVP----TPMAEHDRNWDKL 704 P V W +A AT+YG + G+ GGACGY Q + AA S +L+ G CGAC+E+KC + C+ G PA ++ T+ CP GG C HFD++ +A+ AGI+ V YRRVPC+ G I F + N F YF VL+ G GD+ V + TPM + NW L Sbjct: 56 PSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CS-GQPATVV-ITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPF-YFE-VLIEFEDGDGDLNAVDLMEAGCGWTPMVQ---NWGAL 242
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15 Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQG-YGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QYR-AGIVPVSYRRVPCRKRGGIRFTI-----NGFRYFNLVLVTNVAGAGDI 641 W + AT+YG ++ +G+ GGACGY Q + AA S +++ +GL CG+C+++KC G+ C+ GNP + + T+ CP GG C HFDL+ F +A Q R AG++ + Y RVPC GG+ T + YF VLV G GD+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CS-GNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDL 193
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15 Identity = 59/175 (33.71%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRA-------GIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 659 W+ A AT+YG ++ G+ GGACGYG+L ++S LF +G CGAC+++KC D C+ A+ + T+ CP GG C R HFDL+ F ++A A G + V YRR C+ G I F +N ++ +LV G GDI + +K Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKC-LDHGICS--RRAVTVIVTDECP---------GGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIK 210
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15 Identity = 60/175 (34.29%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 659 W A AT+YG +D G+ GGACGYG L A+S LF G CGAC++++C D C+ A+ + T+ CP GG C R HFDL+ F +LA G + V YRR C+ G I F +N ++ +LV G GDI + +K Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRC-LDASICS--RRAVTVIVTDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLK 207
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15 Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 659 W A AT+YG + G+ GGACGYG L + A++ LF NG CGAC++++C D C+ A+ + T+ CP C+ HFDL+ +F +LA G++PV YRR C+ RG I F +N ++ +LV G GDI + ++ Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRC-LDKSICS--RRAVTVIITDECP-----------GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIR 196
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 53/178 (29.78%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG-GIRFTI--NGFRYFNLVLVTNVAGAGDIVRVSV 656 GG W +A AT+YG + +G GGACG+ N+ + T+ + LF +G CG+C++++C G P C+ ++IT N+ P + HFDL+ F +A+ AGI+ + +RRVPC+ G + F + + +LV G GD+V+V + Sbjct: 89 GGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPA-CSGLPETVIITDMNYYPVSLY--------------HFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDL 251
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 56/195 (28.72%), Postives = 84/195 (43.08%), Query Frame = 3 Query: 147 GVFAGGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKVPTPMAEHDRNW 695 GV W A AT+YG + +G GGACG+ N + T+ + LF +G CGAC++++C +P C+ ++IT N+ P R HFDL+ F +A+ AGI+ + +RRVPC RG + VLV G +V++ V P + R W Sbjct: 24 GVVYTNDWLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPS-CSGQPRTVIITDMNYYP--------------VARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVW 203
BLAST of FC931375 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13 Identity = 55/175 (31.43%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 659 W A AT+YG ++ G+ GGACGYG+L + + A+S LF G CGAC++++C D C+ A+ I AT+ P +G HFDL+ F +A G++ + YRR C+ RG I F +N Y+ +L+ G GDI + ++ Sbjct: 40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRC-LDKTICS--KRAVTIIATDQSP--------SGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIR 203 The following BLAST results are available for this feature:
BLAST of FC931375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931375 ID=FC931375; Name=FC931375; organism=Citrus clementina; type=EST; length=715bpback to top |