FC931379

Overview
NameFC931379
Unique NameFC931379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLTB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ispD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26
Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            +LL GGKG+R  +  PKQY  L G+P+ L++ + + R+  V+E+VVVC+  Y ++F      +   +KF+ PG  RQDSV+SGLQ+V   +  VCIHD  RP V + +V +V   A + GAA L  PA  TIK        VRTLDR  L  + TPQ +
Sbjct:    8 VLLGGGKGERFNSLQPKQYTHLCGEPLILHALHAYQRLPFVQEVVVVCEEQYRELF------LPYSVKFASPGTLRQDSVFSGLQQV--FTPWVCIHDGVRPFVYADEVIEVCSAARKTGAAALASPATYTIKSCAP----VRTLDRDALAVIHTPQCL 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLT2 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ispD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26
Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            +LL GGKG+R  +  PKQY  L G+P+ L++ + + R+  V+E+VVVC+  Y ++F      +   +KF+ PG  RQDSV+SGLQ+V   +  VCIHD  RP V + +V +V   A + GAA L  PA  TIK        VRTLDR  L  + TPQ +
Sbjct:    8 VLLGGGKGERFNSLQPKQYTHLCGEPLILHALHAYQRLPFVQEVVVVCEEQYRELF------LPYSVKFASPGTLRQDSVFSGLQQV--FTPWVCIHDGVRPFVYADEVIEVCSAARKTGAAALASPATYTIKSCAP----VRTLDRDALAVIHTPQCL 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_DESRM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=ispD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25
Identity = 64/161 (39.75%), Postives = 95/161 (59.01%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS--LPGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            ++ A G G RMG  + KQYL L  +PI  ++     ++ ++  IV+V  P    + +E   K N+  K    +PG + RQ SVY GL  +  ++ELV IHD ARPLV   ++  ++ +A RVGAA L VP K T+K  N + +V+ T +R+ LW +QTPQV
Sbjct:    7 VIPAAGMGSRMGTEVKKQYLKLQDRPILAHTIDALEQVPDITGIVLVVSPGEETLCQELILKGNLFNKIMAVVPGGDHRQTSVYHGLCSLPGDTELVVIHDGARPLVQRAEISHIIKEARRVGAAALAVPVKDTVKLVNDQGYVIATPNREKLWAVQTPQV 167          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_GEOKA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacillus kaustophilus GN=ispD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24
Identity = 66/159 (41.51%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I+LA G+GKRM A M KQ+L L G+P+ + +   F R      IV+V +P+    FE+   +  +    +L   G+ERQ SVY+GLQ +    E+V IHD ARP V    + +++  A++ GAA+  V  K TIK+AN   FV +T+DR +LW +QTPQ
Sbjct:    6 IVLAAGRGKRMNAGMNKQFLELGGEPLIVRTLNVFERDERCTRIVLVVNPAERSRFEQLLARFRIQKVAALTDGGEERQHSVYNGLQAL-AGEEIVLIHDGARPFVRVHHLHELVNAAVQYGAAIPAVRVKDTIKKANG-LFVEQTIDRSSLWAVQTPQ 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOBL (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=ispD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24
Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  +  +K N++   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +  A + GAA  GV  K TIK  N + F + T +R+ L+ +QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSAHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRCANQYGAAACGVIPKDTIKIKNEKEFAIDTPNREDLFIVQTPQ 165          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PELTS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ispD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24
Identity = 63/160 (39.38%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G+G RMG    KQYL L G P+  +          VK +V V  P   + F  T  E++ +    ++   G+ERQDSVY+GL  +  ++ +V +HD ARPL+   D+  V+  A   GAA L VP K T+K A  + FV+RTL R+ LW +QTPQ
Sbjct:    7 VVAAAGRGSRMGTETRKQYLSLAGLPVVGHVLRAMEASSAVKSVVTVVAPGEENYFRLTVVERLGIRKVAAIVPGGEERQDSVYNGLLALAPDTGIVVVHDGARPLLSPGDINAVVQAAAAYGAATLAVPVKDTVKMAGRDGFVLRTLSREHLWLVQTPQ 166          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_EUBE2 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=ispD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24
Identity = 63/160 (39.38%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF--EETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            I+LAGG GKRM + +PKQY+ L G+P+  YS   F     V EI++V    Y +    E    +     K    GKER DSV++GLQ++      V IHD ARP +    +       ++  A V   P K TIK A+++ + + T DRKTLW++QTPQV
Sbjct:    5 IVLAGGSGKRMHSEIPKQYMQLNGKPVIYYSLKAFEESEHVDEIILVTAKEYIEYVRNEIAGSQFAKLTKIIEGGKERFDSVWAGLQQIS-EKGYVYIHDGARPCINQNIINACWETVVQTDACVAAAPVKDTIKVADADEYAINTPDRKTLWQIQTPQV 163          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOBM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=ispD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23
Identity = 65/159 (40.88%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEK--INVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  E  +K  IN   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +  A + GAA  G+  K TIK  N + F + T +R+ L+  QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVTLEDKIEVCSEIIDKYSINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYANQYGAAACGIIPKDTIKIKNEKGFAIDTPNREDLFIAQTPQ 165          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOBH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=ispD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  +  +K N++   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +    + GAA  GV  K TIK  N + F + T +R+ L+ +QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQ 165          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOB1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=ispD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  +  +K N++   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +    + GAA  GV  K TIK  N + F + T +R+ L+ +QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQ 165          
The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ISPD_CHLTB1.618e-2642.772-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLT21.618e-2642.772-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_DESRM6.800e-2539.752-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_GEOKA5.756e-2441.512-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOBL5.756e-2440.252-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_PELTS7.518e-2439.382-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_EUBE27.518e-2439.382-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOBM1.675e-2340.882-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOBH2.187e-2339.622-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOB12.187e-2339.622-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

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Properties
Property NameValue
Genbank descriptionC34104E04EF PostHarvP1 Citrus clementina cDNA clone C34104E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bp
CTGCTTCAGCTGAACCTTGCTCTGTCTTCTTCAACTTCTTCTCTCTCACT
GTTCCCAGACAACCACCAAACTTTCTCCAGAACTGGTCATAAAAATCAGT
TCTTTGGCTTGACAAGGAAGGCCAGGCTTGCAACATCCAGGATTAGATGT
TCTGCTAAAGTTGATAATGGTTCTGTCGTTGTTAAAGATAAGAGTGTATC
AGTTATTCTTTTGGCTGGAGGGAAGGGCAAAAGAATGGGTGCGAACATGC
CAAAGCAGTATCTACCACTTTTGGGTCAACCCATTGCATTGTATAGTTTC
TACACTTTCTCACGCATGGTTGAAGTGAAGGAAATTGTGGTAGTTTGTGA
TCCATCTTACAGTGACATCTTTGAAGAAACCAAAGAGAAGATCAATGTAG
ACCTTAAATTCTCACTTCCGGGGAAGGAGAGGCAAGATTCTGTTTACAGC
GGACTTCAGGAAGTTGATTTTAACTCTGAGCTCGTGTGCATCCATGATTC
TGCTAGACCTTTGGTATTATCTAAAGATGTGCAAAAGGTCCTTATGGATG
CTTTGCGGGTCGGAGCAGCTGTACTTGGTGTTCCTGCCAAAGCTACAATT
AAAGAGGCAAATAGCGAATCTTTTGTGGTTAGAACCCTGGACCGCAAAAC
TCTTTGGGAAATGCAGACCCCTCAGGTGATCAAGCCTGGCTTGCTTAAAA
AGGGTTTGAGCTTGTCATAGGGAAGGTCTTGAAGTACTGATGATGTATCT
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