FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_AQUAE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Aquifex aeolicus GN=ispD PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.332e-15 Identity = 55/160 (34.38%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG---AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+LA G+G R+G KQ+ L G+P+ ++S + E E+++V + D K K++ +K G ERQDSV++ L + ++V IHDSARPL +K+ ++ ++G V+ PA+ T+KE E V++TL+R +W QTPQ Sbjct: 5 IILAAGRGSRIGFR--KQFATLCGKPLFMHSLEKVLDIFE--EVILVLPEDFLD-----KVKVHPKVKKVAGGPERQDSVFNALLQA--TGDIVVIHDSARPLA----TKKMFLEVAQLGDYHGKVVASPARDTLKEV-VEGKVIKTLNRSLIWHAQTPQ 148
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHELP (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ispD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.088e-14 Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL----MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G RMGA +PKQYL L QPI ++ + ++++ P S F + + + L + GKER DSV S L +V S +HD+ARP + + D+ K++ + A+L +P + T+K + + T+ R+ LW TPQ+ Sbjct: 11 IVPAAGIGARMGAEIPKQYLMLNHQPILAHTLDRLLEHPRIDKVIIALSPEDSH-FAKLSQASHPKLMTVIGGKERADSVLSAL-KVASQSAWALVHDAARPCLSAADIDKLIAACETEEGHQQGAILAMPVRDTMKRSGKGGAIQETVCRENLWHALTPQL 170
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_MAGSA (Bifunctional enzyme ispD/ispF OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=ispDF PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.088e-14 Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+G+R G ++PKQY L G+ + ++ F+ E+ + V P +++ +N+ L+ G RQDSV GL + D N + V IHD ARP + + +V+ R A+ VP T+K + FV T+DR L+ QTPQ Sbjct: 7 LVVAAGRGRRFGGDLPKQYHDLAGRMVLRHTLAAFATNPEIGAVRAVIHPDDRQLYDMAAAGLNL-LEPVHGGATRQDSVRLGLDSLKDLNPDKVLIHDGARPFIDHGTIGRVIRALDRHPGALPVVPVADTLKR-GQDGFVADTVDRANLFRAQTPQ 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_BRASO (Bifunctional enzyme ispD/ispF OS=Bradyrhizobium sp. (strain ORS278) GN=ispDF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.421e-14 Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQE-VDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 IL+A G+G R GA PKQY + G+ + + F+ EV + V +P D+F + + + G RQ SV +GL+ V E+V IHD+ARP V + + ++ A + GAA+ P TIKE + + T +R L QTPQ Sbjct: 10 ILVAAGRGLRAGAGGPKQYRTIGGRTVIHRALAAFAEHPEVAVVQPVVNPDDIDVFNAAVAGLRHEAP-ARGGATRQASVLAGLEALVPHKPEIVLIHDAARPFVTPAVISRAIIAANKTGAAIPVAPVTDTIKEVGASGDITATPERAKLRIAQTPQ 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PROMA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Prochlorococcus marinus GN=ispD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.856e-14 Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVL-GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G GKRMGAN K L + G+ + ++ R + I +V PS + ++ + K+ G RQ+SV GL+ + +++ V IHD AR LV + K + LR G +V+ P TIK+ + + F+ +T +R LW QTPQ Sbjct: 4 LIAAAGSGKRMGANCNKLLLKVAGRSVLAWTLDAVKRSNSISWIGIVGQPSDKEAIVSIFDECALQAKWINGGDSRQESVQLGLEGLPLDAKHVLIHDGARCLVEPELFDK-CSEMLRQGVSVIAATPVIDTIKKVSLDGFINKTFNRAELWAAQTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD2_LISMO (Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 OS=Listeria monocytogenes GN=ispD2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.856e-14 Identity = 47/164 (28.66%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 208 LLAGGKGKRMG-ANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFN-----SELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +LAGGKG RMG NMPKQYLPL G+PI +++ F ++I++ + + ++ +K D + + G +R +++ +G++ V+ +++ HD+ RP + + +++ + AL G+ +PA TI E+ + F+ R +++ QTPQ Sbjct: 6 ILAGGKGTRMGNVNMPKQYLPLKGKPIIVHTIEKFILNDRFEKIIIATPKDWINHTQDIIKKYIFDSRVIVIEGGTDRNETIMNGIRYVEKEFGLNEDDIIVTHDAVRPFITHRIIEENIDMALEFGSVDTVIPAVDTIVESTNHDFITDIPVRGNIYQGQTPQ 169
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHRSD (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ispD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSV---YSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG--AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G+G+RMGA PKQYL + G+P+ ++ + + DP + E D + G+ER DSV + L +V + +LV +HD ARP V +D+++ L +AL +L P T+K A++ VV T+ R+ LW TPQ Sbjct: 7 IVPAAGQGRRMGAECPKQYLDIAGRPVLAHTLARLHEAFPEAALRLCLDPDDTRFSPEWVP--FADWQRVAGGRERVDSVENALASLADVAADDDLVLVHDVARPCVAVEDLRR-LREALTTSPEGGLLAAPVADTMKRADARGHVVHTVSREGLWHAMTPQ 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_VIBVY (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Vibrio vulnificus (strain YJ016) GN=ispD PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14 Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGL---QEVDFNSELVCIHDSARPLVLSKDVQKVLMD-ALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL + G+ I ++ + ++VV DP YSD+ + D+ GKER DSV S L + ++ V +HD+ARP V +D+ ++ + +L P + T+K AN++ + T+DR LW TPQ+ Sbjct: 11 VVPAAGVGSRMKADRPKQYLQIHGKTILEHTIERLLSHPAITQVVVAVSEDDPYYSDLAIAQ----HPDIIRVAGGKERADSVLSALCFLSQQPQKTDWVLVHDAARPCVAHQDIDALIERCSSHETGGILATPVRDTMKRANAQQMIDHTVDRNALWHALTPQM 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_VIBVU (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Vibrio vulnificus GN=ispD PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14 Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFN---SELVCIHDSARPLVLSKDVQKVLMD-ALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL + G+ I ++ + ++VV DP YS++ + D+ GKER DSV S L+ + ++ V +HD+ARP V +D+ ++ + +L P + T+K AN++ + T+DR LW TPQ+ Sbjct: 11 VVPAAGVGSRMKADRPKQYLQIHGKTILEHTIERLLSHPAITQVVVAVSEDDPYYSELAIAQ----HPDIVRVAGGKERADSVLSALRFLSLQQQKADWVLVHDAARPCVAHQDIDALIERCSSHETGGILATPVRDTMKRANAQQMIDHTVDRNALWHALTPQM 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_LEPBL (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispD PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE-RQDSVYSGLQEVDFNSE-LVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681 ++LAGG G RMG+ +PKQ+L +PI +++ F + K+IV+V P + E + + G E R S+ GL + SE ++ IHD+ARP VL K++ + + G + L T+ E S LDR+ +W M+TPQ I Sbjct: 13 LILAGGTGTRMGSEIPKQFLEFSNEPILIHTLKKFQSWKKQKQIVLVSHPEFISETESICSPFLENQDCIIEGGETRHGSMLRGLSALTIQSEDILLIHDAARPFVLLKELDLLCENIRENGISTLASRTSETVLE-ESNGKTSSFLDREHIWFMKTPQGI 172 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |