FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEA6 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=ispD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.053e-14 Identity = 50/158 (31.65%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR-VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM A+ PKQYL + G+ I ++ ++++I+V +P F+ +K G ER DSV +GL + N++ V +HD+ARP + D+ K+L A A+L + T+K NS ++ T R LW TPQ Sbjct: 10 VVPAAGIGQRMQADRPKQYLTIAGKTILEHTLENLYAHPQIEQIIVAINP-LDQYFDSLPIASKTWVKRVDGGGERADSVLAGLNSLQ-NADWVLVHDAARPCLAQDDLSKLLATAEHSEHGAILACRVRDTMKRGNSSHDILHTESRDNLWHALTPQ 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEPF (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ispD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVV---VCDPSYSDIFEETKEKIN-VDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L G+ I +S F +K +VV V DP + ++ + +I VD G ER SV + L + + + V +HD+ARP + D+ K+L + VG +L VPAK T+K + VV T+DR +W+ TPQ+ Sbjct: 11 VIPAAGVGARMAADRPKQYLQLGGRTILEHSLGCFLDHPSLKGLVVSLAVDDPYWPNLASASDPRIQRVD-----GGTERSGSVLNALLHLHAQGADDEDWVLVHDAARPNLSRDDLDKLLAELANDPVGG-LLAVPAKDTLKRVDKHGRVVETVDRSVIWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEE4 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas entomophila (strain L48) GN=ispD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 58/169 (34.32%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGL----QEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L GQ I +S F +K +VV DP + + + DL+ G+ER DSV + L + + + V +HD+ARP + D+ K+L + VG +L VPA+ T+K A ++ V T+DR T+W+ TPQ+ Sbjct: 11 VIPAAGIGARMAADRPKQYLQLGGQTILEHSLDCFLDHSALKGVVVSIAEDDPYWPGL------RCASDLRIQRAPGGRERADSVLNALLLLHAQGASDDDWVLVHDAARPNLARSDLDKLLSELADDPVGG-LLAVPARDTLKRAGADGRVAATVDRSTVWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CYAA5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=ispD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 54/163 (33.13%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP------GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G GKRMG+N K L LLG+P+ ++ +++ + ++ P Y F E K I + F+ P G+ RQ SVY+GLQ + ++ V IHD AR LV + + L + + K TIK +S F+ T +R LW QTPQ Sbjct: 4 LIPAAGMGKRMGSNRNKLLLTLLGKPLLSWTLLAAEASQKIEWVGIIGQP-YD--FPEFKT-ILTTISFTKPVELIQGGETRQASVYNGLQALPKAADNVLIHDGARCLVTPDLFDRCAEELLTCQGLIAAISVKDTIKIVDSNQFIKDTPNRSNLWAAQTPQ 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CORDI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Corynebacterium diphtheriae GN=ispD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSD-----IFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLG-VPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A GKG R+GA++PK Y+PL P+ + S V E++V+ P D + ++ ++ G ER DSV+ GLQ + +V IHDSAR L + +V L AV+ VP TIK + + VV T R+ L +QTPQ Sbjct: 8 LVAAAGKGTRLGADLPKAYVPLRDIPLVVRSVRAMITSAVVDEVIVIISPQMQDYAAALLLRWGLFSADIPVRLVHGGAERADSVWCGLQAIADTDAVVLIHDSARALTPPGMIARVARAVLDGNKAVIPVVPVADTIKTVHGTT-VVATPPRRDLRAVQTPQ 169
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_BACFN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK---EANSESFVVRTLDRKTLWEMQTPQV 678 +++AGGKG RMG+ +PKQ+LP+ G+P+ + + F R E +I++V D + E E+ D+K + G+ R SV +GL V+ +V IHD RP V + + + ++A+ A + + T++ E+ SE T+ R +QTPQV Sbjct: 6 LIVAGGKGLRMGSELPKQFLPIGGKPVLMRTLEAFHRFDEKMQIILVLPREQQDFWRELCEEHGFDIKHLIADGGETRFHSVKNGLALVN-GIGVVGIHDGVRPFVSQEVIARCFLEAVVRKAVIPVIDVVETVRHLTESGSE-----TVSRNDYKLVQTPQV 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_THESQ (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Thermotoga sp. (strain RQ2) GN=ispD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET--KEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP-AKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ILLA GKG+RM N+PKQ+L + G+ + Y TF + + +V+V + ++ E+ EK+ L G R SV S L+ ++ F+ V +HDSARP + K V +VL A GAA L + + A ++ N + + RK ++ + TPQ Sbjct: 5 ILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKV---LGIVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGAATLALKNSDALVRVENDR---IEYIPRKGVYRILTPQ 159
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_THEMA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Thermotoga maritima GN=ispD PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET--KEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP-AKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ILLA GKG+RM N+PKQ+L + G+ + Y TF + + +V+V + ++ E+ EK+ L G R SV S L+ ++ F+ V +HDSARP + K V +VL A GAA L + + A ++ N + + RK ++ + TPQ Sbjct: 5 ILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKV---LGIVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGAATLALKNSDALVRVENDR---IEYIPRKGVYRILTPQ 159
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_THEFY (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Thermobifida fusca (strain YX) GN=ispD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 208 LLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSGLQEVD--FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI----KEANSESFVVRTLDRKTLWEMQTPQ 675 +LAGG G RMG+ PKQ L L GQ I S EV E+VVV + ++ E+ + D + G R +S + LQ VD +++L+ +HD+ARPLV + + + + VGA + VP+ T+ +A+ + DR L MQTPQ Sbjct: 17 VLAGGVGSRMGSAHPKQLLRLAGQTILERSVAALCAAPEVDEVVVVMNAAHLAEAEKILAEGRYDKVSRIVPGGASRSESSLAALQAVDDYDDNDLLLLHDAARPLVSGRTITACVTELTEVGAVGVAVPSSDTVVQVTLDASGREVIAAVPDRAALRRMQTPQ 180
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SOLUE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=ispD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 57/170 (33.53%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMP-------KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR---TLDRKTLWEMQTPQV 678 IL A G G RMG KQ++ L G PI +++ F+ V EIV+ ++ E T+E ++ G RQ+SV + L + + ELV +HD+ RP + + V +A GAA++GVPA T+K+ + VR TL R+ L QTPQV Sbjct: 6 ILPAAGLGTRMGKGTAEKAGTSRKQFMLLEGSPILMHTVRKFAASPRVGEIVIAVRAEDTEWVREVVTQEFPGGRVRVVAGGNSRQESVENALSSLSPDCELVAVHDAVRPFIDLDIMHAVFDEAAETGAAIVGVPAVDTVKQVTRGTTHVRVRATLPREKLVMAQTPQV 175 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |