FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_GEOMG (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS------LPGKERQDSVYSGLQEVDFNS---ELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G GKRMGA++ KQYL L G PI + F R V I VV +D +E++ FS G ERQ SV +GL+ ++ + +++ IHD RP V + + A A++ VPAK T+K + + T R+TLW QTPQ Sbjct: 6 LIPAAGMGKRMGASINKQYLLLGGMPILARTLEVFERSPLVDGIFVVIP---ADEIPFCREQVVERHGFSKVRSIVAGGAERQQSVLNGLRAMEGTAGEYDVILIHDGVRPFVTEDILGRATATARENDGALVAVPAKDTVKVV-EDGIITATPSRETLWLAQTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_BACFR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Bacteroides fragilis GN=ispD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 52/163 (31.90%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK---EANSESFVVRTLDRKTLWEMQTPQV 678 +++AGGKG RMG+ +PKQ+LP+ G+P+ + + F R E +I++V D + E E+ D+K + G+ R SV +GL V+ +V IHD RP V + + + +A+ A + + T++ E+ SE T+ R +QTPQV Sbjct: 6 LIVAGGKGLRMGSELPKQFLPIDGKPVLMRTLEAFHRFDEKMQIILVLPREQQDFWRELCEEHGFDIKHQIADGGETRFHSVKNGLALVN-GIGVVGIHDGVRPFVSQEVIARCFREAVVRKAVIPVIDVVETVRHLTESGSE-----TVSRNDYKLVQTPQV 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_RHOPA (Bifunctional enzyme ispD/ispF OS=Rhodopseudomonas palustris GN=ispDF PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++A G+G R GA PKQY L G+P+ + F V + V +P +++F +N G RQ SV +GL+ + + ++V IHD+AR V + + + + A GAA+ VP TIK+ +S V T DR +L QTPQ Sbjct: 10 IIVAAGRGLRAGAGGPKQYRSLAGRPVIARAMEPFCTHPGVMAVQPVTNPDDTEMFNAAVAGLNFRPAVG-GGATRQASVRAGLEALAELKPDIVLIHDAARCFVTPELISRAITAAGATGAALPVVPVTDTIKQVDSSGAVDATPDRASLRIAQTPQ 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_RHOBA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Rhodopirellula baltica GN=ispD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13 Identity = 54/171 (31.58%), Postives = 83/171 (48.54%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN--VDLKFSLPGKERQDSVYSGLQEVD-FNSE----------LVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G+R G+ K + L G+P+ ++ F +V++IV+ F E I+ V + G R +SV + L++V F +E LV IHD+ARPLV D+ +V+ A GAA+L P T+K A + T+DR+ + TPQV Sbjct: 10 IMPAAGSGQRFGSQSNKLFAHLDGKPLWQHAIDRFQHRGDVRQIVLAVSEEDESRFREQIAAISSAVPIHLVRGGATRSESVGAALEQVKRFAAESAAANASTQTLVAIHDAARPLVRQSDLDRVIAKAAETGAAILAAPVSGTLKRATGDG--SETVDRRNTYVALTPQV 178
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_FRASC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Frankia sp. (strain CcI3) GN=ispD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13 Identity = 55/158 (34.81%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLG-VPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G+G+R+G PK L G+P+ + + + R V +IVV P+ D + + D+ G ER DSV L+ VD + +V +HD+ARPL + V V L AV+ VP T+KE +++ VVRT R L +QTPQ Sbjct: 17 IVPAAGRGERLGGGTPKALRALGGRPMLVRTVESLRRSRLVTQIVVAAPPTLVDAVAQL---LGGDVYVIAGGAERVDSVRRALRAVDDDVSVVLVHDAARPLTPPELVDAVAAAVLDGHPAVIPVVPLADTVKEVDADGRVVRTPPRDGLRAVQTPQ 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_ANADE (Bifunctional enzyme ispD/ispF OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=ispDF PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13 Identity = 57/160 (35.62%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR---TLDRKTLWEMQTPQ 675 IL AGG G+R G + KQ+L L G+ + S + V +VVV P E + ++ G R DSV +GL D +V +HD+ARP + +V A R GAA+ +PA T+K A + + V R TLDR+T+W QTPQ Sbjct: 10 ILAAGGSGQRAG--VAKQWLVLGGESVLRRSARVLAACDAVDGLVVVVPPGDEARGEAELAGLGKPVRAVAGGPARADSVRNGLAAAD--GAVVLVHDAARPFASAALAGRVAEAAARDGAALAALPATDTVKRAEAGAEVPRVLETLDRRTVWLAQTPQ 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_THEP1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=ispD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET--KEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP-AKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ILLA GKG+RM N+PKQ+L + G+ + Y TF + + +V+V + ++ E+ EK+ L G R SV S L+ ++ F+ V +HDSARP + K V +VL A GAA L + + A ++ N + + RK ++ + TPQ Sbjct: 5 ILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKV---LGIVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGAATLALKNSDALVRVENDR---MEYIPRKGVYRILTPQ 159
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHEDO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ispD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRV-GAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G G RM A MPKQYL L Q I ++ ++ +++V P + D+F + + L + G ER DSV + L V +HD+ARP + D+ K+L A+L +P + T+K ++ + T+DR LW TPQ Sbjct: 16 IVPAAGIGARMAAGMPKQYLTLGAQSILGHTLDALLSHPQIAQVIVALHP-HDDMFLGLPQAKHSKLLTVIGGGERADSVLAAL-AVAPQDAWALVHDAARPCLTHSDIDKLLASTSEFPQGAILAMPVRDTMKRSDDTGVINHTVDRALLWHALTPQ 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_GLOVI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Gloeobacter violaceus GN=ispD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 50/160 (31.25%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN--VDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSES-FVVRTLDRKTLWEMQTPQ 675 ++ A G+G RMGA+ K LPL G+P+ ++ ++ + I ++ P + +K+ V + + G+ RQ SVY GL + ++ V IHD AR L ++ A V VP K TIK+ +S V +T+ R+ LW QTPQ Sbjct: 4 LIPAAGRGSRMGADGNKLLLPLSGRPLLAWTLAAAAQAPSTRWIGIIGQPMDEEAIRLLAQKLGLRVPVHWIEGGETRQQSVYRGLLALPVEAQQVLIHDGARCLASPALFERCAAALAEFSAIVAAVPVKDTIKQVYPQSRQVEKTIPREQLWAAQTPQ 163
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SERP5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Serratia proteamaculans (strain 568) GN=ispD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 49/161 (30.43%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL--MDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQV 678 +L A G G RM A+ PKQYL + Q I ++ + R + +++V P F + + ++ ++ G++R DSV +GLQ ++ V +HD+ARP + ++D++++L + VG +L P + T+K A S + T++R+ LW TPQ+ Sbjct: 14 VLPAAGIGSRMQADCPKQYLTIGHQTILEHAIHALLRHPRIPQVIVAIGPDDQQ-FHQLPIAKDPRVRVTVGGQQRADSVMAGLQLAG-EAKWVLVHDAARPCLHAEDLERLLAITEHSEVG-GILAAPVRDTMKRAEPGRSTISHTVERQDLWHALTPQL 171 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |