FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_HAEDU (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Haemophilus ducreyi GN=ispD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G G RM A +PKQYL L G+ I ++ F ++ +IV+ D + I T +KI + G R +SV++ LQ +D +S +HD+ARP + D+ K+L + G A+L P T+K A + T DR TLW TPQ Sbjct: 8 IIPASGIGSRMNAALPKQYLTLQGKTILEHTVAIFLNHPQIDKIVIALSANDQHHQHISLLTSDKI----QLVNGGASRAESVFNALQSIDEHS-WALVHDAARPCLKRSDLDKLLQITDQNG-AILASPVVDTLKRAEGNK-ISHTEDRTTLWHALTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNJA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFN---SELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK--EANSESFVVR-TLDRKTLWEMQTPQ 675 ++ A G GKRMGA + K LPLLGQPI ++ R ++ I ++ P E+ +++ L G RQ+SVY G++ + +N E V IHD AR L K + +V + G+P K TIK E + ++ T +R LW QTPQ Sbjct: 4 LIPAAGSGKRMGAAVNKLLLPLLGQPILAWTLQAADRASSIEWIGILSQPGDWPAIEQILAAMDLSTPVQLLQGGATRQESVYRGVEYL-YNLGTVERVLIHDGARCLATPKLFDRCSAALQQVDGLIAGIPVKDTIKVTETGPKGIQIQSTPERSRLWAAQTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEPW (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas putida (strain W619) GN=ispD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 55/167 (32.93%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGL----QEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L GQ + +S F +K +VV DP + + + +I + + G+ER DSV + L + +++ V +HD+ARP + D+ ++L + VG +L VPA+ T+K A++ V T+DR T+W+ TPQ+ Sbjct: 11 VIPAAGVGARMAADRPKQYLQLGGQTLLEHSLDCFLGHPTLKGVVVSIAADDPYWPGLRCASDPRI----QRASGGRERADSVLNALLLLHAQDAADTDWVLVHDAARPNLARTDLDRLLSELADDPVGG-LLAVPARDTLKRADANGRVSATVDRSTIWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_DEHSC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=ispD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 52/160 (32.50%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 +++A G+ +RM K + L G+P+ ++ F +V +I +V + +E ++ N ++ G RQDSV SGL + + + IHD ARPL+ + + L A G+A+ VP K TIKE + E V +TL R+ L +QTPQV Sbjct: 10 VIVAAGQSRRM-EGQDKIFALLAGKPVLAHTLSVFQESPQVDDIALVMAEHNIEKAKELVKEYNFSKVIAICSGGTLRQDSVRSGLSAL-CDCGWILIHDGARPLLEPDSIPEGLEAAKLCGSAIAAVPLKDTIKEISPEGLVEKTLPRERLISVQTPQV 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_DEHSB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Dehalococcoides sp. (strain BAV1) GN=ispD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 52/160 (32.50%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 +++A G+ +RM K + L G+P+ ++ F +V +I +V + +E ++ N ++ G RQDSV SGL + + + IHD ARPL+ + + L A G+A+ VP K TIKE + E V +TL R+ L +QTPQV Sbjct: 10 VIVAAGQSRRM-EGQDKIFALLAGKPVLAHTLSVFQESPQVDDIALVMAEHNIEKAKELVKEYNFSKVIAICSGGTLRQDSVRSGLSAL-CDCGWILIHDGARPLLEPDSIPEGLEAAKLCGSAIAAVPLKDTIKEISPEGLVEKTLPRERLISVQTPQV 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_XYLFT (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI-FEETKEKINVDLKFSLPGKERQDSVYSG---LQEVDFNSELVCIHDSARPLVLSKDVQKVL-MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G+G R G+ +PKQYLP++G+P+ +Y+ + V ++VV + D+ + E L G R SV SG L +V + V +HD+ARP V D++++L A+L VP + T+K A S+ + T R+ LW TPQ+ Sbjct: 8 VIPAAGRGVRFGSPVPKQYLPVVGRPLIVYTLEALAAHPAVCGLMVVV--AEGDLAWSGWTELAGKPLLTCSGGVTRAASVLSGLLALPQVVHADDFVLVHDAARPNVALSDLERLLEAGCAHPVGAILAVPVRDTLKRAGSDGSIDGTEPRERLWRAFTPQL 168
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_XYLFM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Xylella fastidiosa (strain M12) GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI-FEETKEKINVDLKFSLPGKERQDSVYSG---LQEVDFNSELVCIHDSARPLVLSKDVQKVL-MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G+G R G+ +PKQYLP++G+P+ +Y+ + V ++VV + D+ + E L G R SV SG L +V + V +HD+ARP V D++++L A+L VP + T+K A S+ + T R+ LW TPQ+ Sbjct: 8 VIPAAGRGVRFGSPVPKQYLPVVGRPLIVYTLEALAAHPAVCGLMVVV--TEGDLAWSGWTEVAGKPLLTCSGGVTRAASVLSGLLALPQVVHADDFVLVHDAARPNVALSDLERLLEAGCAHPVGAILAVPVRDTLKRAGSDGSIDGTEPRERLWRAFTPQL 168
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_XYLF2 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Xylella fastidiosa (strain M23) GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI-FEETKEKINVDLKFSLPGKERQDSVYSG---LQEVDFNSELVCIHDSARPLVLSKDVQKVL-MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G+G R G+ +PKQYLP++G+P+ +Y+ + V ++VV + D+ + E L G R SV SG L +V + V +HD+ARP V D++++L A+L VP + T+K A S+ + T R+ LW TPQ+ Sbjct: 8 VIPAAGRGVRFGSPVPKQYLPVVGRPLIVYTLEALAAHPAVCGLMVVV--AEGDLAWSGWTELAGKPLLTCSGGVTRAASVLSGLLALPQVVHADDFVLVHDAARPNVALSDLERLLEAGCAHPVGAILAVPVRDTLKRAGSDGSIDGTEPRERLWRAFTPQL 168
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_STRA5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Streptococcus agalactiae serotype V GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 205 ILLAGGKGKRMGAN-MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD-LKFSLPGKER-QDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ AGG G+RM PKQ+L + G+PI +++ F + +VVVC + D E+ N+ +K + G E Q S++ GL+ + + +V IHD RPL+ + + + G+AV V AK T+ N S + +DR + + PQ Sbjct: 6 VIFAGGVGRRMNTKGKPKQFLEVHGKPIIVHTIDIFQNTEAIDAVVVVCVSDWLDYMNNLVERFNLTKVKAVVAGGETGQMSIFKGLEAAEQLATDDAVVLIHDGVRPLINEEVINANIQSVKETGSAVTSVRAKETVVLVNDSSKISEVVDRTRSFIAKAPQ 168
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_STRA1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Streptococcus agalactiae serotype Ia GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 205 ILLAGGKGKRMGAN-MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD-LKFSLPGKER-QDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ AGG G+RM PKQ+L + G+PI +++ F + +VVVC + D E+ N+ +K + G E Q S++ GL+ + + +V IHD RPL+ + + + G+AV V AK T+ N S + +DR + + PQ Sbjct: 5 VIFAGGVGRRMNTKGKPKQFLEVHGKPIIVHTIDIFQNTEAIDAVVVVCVSDWLDYMNNLVERFNLTKVKAVVAGGETGQMSIFKGLEAAEQLATDDAVVLIHDGVRPLINEEVINANIQSVKETGSAVTSVRAKETVVLVNDSSKISEVVDRTRSFIAKAPQ 167 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |