FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PROM5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 43/157 (27.39%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM A K + L G+ + ++ + V + ++ P+ + +K + ++++ G RQ+SV++GL + N+E V IHD AR L+ + K ++ A +L TIK ++E ++ +T +R+ LW QTPQ Sbjct: 4 LIPAAGSGRRMEAGKNKLLIDLEGESLIYWTLKSVFSASLVSWVGIIGQPNDKKKLLNSVKKFSNEIEWINGGNTRQESVFNGLNSLPSNAEKVLIHDGARCLINPDLINKCALELEENDAVILATKVTDTIKIVDNEGYIQQTPNRQNLWAAQTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PROM4 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G RMGA+ K L + G+PI ++ + + +K I ++ P + + + +++ GK RQ+SV GL + + V IHD AR LV + + L+ A + P TIK +S ++ T DR LW QTPQ Sbjct: 4 LIAAAGSGSRMGADCNKLLLQIEGEPILKWTLESVALASSIKWIGIIGQPCDKHAIMQIVQDFSKPVQWINGGKTRQESVQKGLAALPDEAIHVLIHDGARCLVEPELFDQCAQMVLKGVAIIAATPVVDTIKTVDSNGYISGTPDRSKLWAAQTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLPB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=ispD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 48/170 (28.24%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 205 ILLAGGKGKRMG--ANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN-VDLKFSLPG-KERQDSVYSGLQEVDFN-------SELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK--EANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G GKRM ++ KQ+L + G P+ ++ F R V + + ++ E +++ + +PG KERQDS+Y+ ++ ++ + + +HD ARP + ++ ++ + + GA V K TIK N + RTLDR L ++QTPQ Sbjct: 6 IIAASGVGKRMKLQGSLSKQFLQIGGFPVIYHTLSAFERSASVDSVFIATRQESIELLENMRDEYGFTKIAAIIPGGKERQDSIYNCIELIERQILDSGTAPDAILVHDGARPFIQPDEIDEIAALSAQYGACVPATKPKDTIKFISENDPGYFGRTLDRSRLLQVQTPQ 175
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDL_DANRE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase-like protein OS=Danio rerio GN=zgc:154151 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN-VDLKFSLPGKERQDSVYSGLQEVDFNSE-------LVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +L AGG G+RMG PKQ+ + +P+ Y+ F R+ + +VVV D+ K N +K G R S+Y+GLQ +++ +V IHD+ RP V + K+ + A GA+ P +T+ SES++ +L+R + PQ Sbjct: 72 VLPAGGSGERMGLTTPKQFCSIFNRPLISYTIQAFERLPWIVMVVVVIAKDNHDLMLNIVRKFNHTKVKVVHGGTTRHRSIYNGLQAFSDSTDSSTPKPKVVIIHDAVRPFVEEDLLLKITLAAKEQGASGAIRPLVSTVIATTSESYLDHSLERAKYRASEMPQ 236
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_XYLFA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Xylella fastidiosa GN=ispD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI-FEETKEKINVDLKFSLPGKERQDSVYSG---LQEVDFNSELVCIHDSARPLVLSKDVQKVL-MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G+G R G+ +PKQYLP++G+P+ +Y+ + V ++VV + D+ + E L G R SV SG L +V + V +HD+ARP V D++++L A+L VP + T+K A ++ + T R+ LW TPQ+ Sbjct: 8 VIPAAGRGVRFGSPVPKQYLPVVGRPLIVYTLEALAAHPAVCGLMVVV--AEGDLAWSSWTEVAGKPLLTCSGGVTRAASVLSGLLALPQVVHADDFVLVHDAARPNVALSDLERLLEAGCAHPVGAILAVPVRDTLKRAGADGSIDGTEPRERLWRAFTPQL 168
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_STRA3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Streptococcus agalactiae serotype III GN=ispD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 205 ILLAGGKGKRMGAN-MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD-LKFSLPGKER-QDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ AGG G+RM PKQ+L + G+PI +++ F + +VVVC + D E+ N+ +K + G E Q S++ GL+ + + +V IHD RPL+ + + + G+AV V AK T+ N S + +DR + + PQ Sbjct: 5 VIFAGGVGRRMNTKGKPKQFLEVHGKPIIVHTIDIFQNTEAIDAVVVVCVSDWLDYMNNLVERFNLTKVKAVVAGGETGQMSIFKGLEAAEQLATDDAVVLIHDGVRPLINEEVINANIKSVKETGSAVTSVRAKETVVLVNDSSKISEVVDRTRSFIAKAPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHRVO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chromobacterium violaceum GN=ispD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 53/160 (33.12%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 214 AGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDP--SYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVL--MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 A G G R GA PKQYL L G+P+ ++ T + + +V E+ VV P + D F K++V + G R SV SGL + + + V +HD+AR + V++++ + VG +L +P T+K A+ + V T+ R LW QTPQ+ Sbjct: 7 AAGSGSRFGAPSPKQYLQLNGKPLMWHTLATVAAVPDVDEVAVVISPQDEWFDDFAWDLPKLSV---HRVGGASRAQSVASGLAALACADDDWVLVHDAARCCLSVAAVERLIAALSGHAVG-GLLALPVPDTVKRADIDGHVAATVPRNGLWLAQTPQM 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_MICAN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=ispD PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV-----DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G GKRMG++ K L L G+P+ + T +E + I+ + + + FEE + I ++ G+ RQ SVY+GLQ + +E V IHD AR L + + + +P K TIK +S+ ++ T DR LW QTPQ Sbjct: 4 LIPAAGMGKRMGSDRNKLLLTLHGKPLLAW---TLLAAMESRAIIWIGIMAQPEDFEEIRAIITPINALKPVQIIQGGETRQKSVYNGLQALPEGAETVLIHDGARCLATPELFDRCAAALATCQGFIAAIPVKDTIKIVDSKGWIEDTPDRSRLWAAQTPQ 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_GEOSL (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacter sulfurreducens GN=ispD PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 214 AGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVV--------CDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 A G GKRMGA++ KQYL L G+PI ++ F V I V+ C + + TK + V G ERQ SV +GL+ ++ + +++ IHD RP V + + + A A++ VPAK T+K + + T R+TLW QTPQ Sbjct: 9 AAGMGKRMGASINKQYLILAGRPILAHTLSVFEGASFVDGIFVITPEDEIPFCRDHVVERYGFTKVRGIV-----AGGAERQHSVLNGLRAMEGTVADDDVILIHDGVRPFVSTDVLARATAVAREDDGALVAVPAKDTVKTV-EDGIITGTPPRETLWLAQTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD2_VIBPA (Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 OS=Vibrio parahaemolyticus GN=ispD2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRM-GANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD-LKFSLPGKER-QDSVYSGL----QEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ AGG G RM + PKQ+L L +P+ +Y+ F + IVVVC + D + K ++ +KF +PG E Q+S+++GL +E D NS +V IHD RPL+ + + + + G+A+ P T ++E V DR + PQ Sbjct: 5 LIFAGGVGTRMQNSTKPKQFLELYNKPVIIYTLEKFEENKNIDAIVVVCVEPWIDYLRKLLFKFDIQKVKFVIPGGETGQESIFNGLCKIEEEFDHNS-VVLIHDGVRPLINDEIINRNIEAVKSHGSAITTCPPVETFVLVDNEDVVKDVHDRSLSRLAKAPQ 167 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |