FC931379

Overview
NameFC931379
Unique NameFC931379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PROM5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 43/157 (27.39%), Postives = 80/157 (50.96%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G G+RM A   K  + L G+ +  ++  +      V  + ++  P+       + +K + ++++   G  RQ+SV++GL  +  N+E V IHD AR L+    + K  ++     A +L      TIK  ++E ++ +T +R+ LW  QTPQ
Sbjct:    4 LIPAAGSGRRMEAGKNKLLIDLEGESLIYWTLKSVFSASLVSWVGIIGQPNDKKKLLNSVKKFSNEIEWINGGNTRQESVFNGLNSLPSNAEKVLIHDGARCLINPDLINKCALELEENDAVILATKVTDTIKIVDNEGYIQQTPNRQNLWAAQTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PROM4 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G G RMGA+  K  L + G+PI  ++  + +    +K I ++  P       +  +  +  +++   GK RQ+SV  GL  +   +  V IHD AR LV  +   +     L+  A +   P   TIK  +S  ++  T DR  LW  QTPQ
Sbjct:    4 LIAAAGSGSRMGADCNKLLLQIEGEPILKWTLESVALASSIKWIGIIGQPCDKHAIMQIVQDFSKPVQWINGGKTRQESVQKGLAALPDEAIHVLIHDGARCLVEPELFDQCAQMVLKGVAIIAATPVVDTIKTVDSNGYISGTPDRSKLWAAQTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLPB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=ispD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 48/170 (28.24%), Postives = 84/170 (49.41%), Query Frame = 1
Query:  205 ILLAGGKGKRMG--ANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN-VDLKFSLPG-KERQDSVYSGLQEVDFN-------SELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK--EANSESFVVRTLDRKTLWEMQTPQ 675
            I+ A G GKRM    ++ KQ+L + G P+  ++   F R   V  + +       ++ E  +++     +   +PG KERQDS+Y+ ++ ++          + + +HD ARP +   ++ ++   + + GA V     K TIK    N   +  RTLDR  L ++QTPQ
Sbjct:    6 IIAASGVGKRMKLQGSLSKQFLQIGGFPVIYHTLSAFERSASVDSVFIATRQESIELLENMRDEYGFTKIAAIIPGGKERQDSIYNCIELIERQILDSGTAPDAILVHDGARPFIQPDEIDEIAALSAQYGACVPATKPKDTIKFISENDPGYFGRTLDRSRLLQVQTPQ 175          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDL_DANRE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase-like protein OS=Danio rerio GN=zgc:154151 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN-VDLKFSLPGKERQDSVYSGLQEVDFNSE-------LVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            +L AGG G+RMG   PKQ+  +  +P+  Y+   F R+  +  +VVV      D+      K N   +K    G  R  S+Y+GLQ    +++       +V IHD+ RP V    + K+ + A   GA+    P  +T+    SES++  +L+R      + PQ
Sbjct:   72 VLPAGGSGERMGLTTPKQFCSIFNRPLISYTIQAFERLPWIVMVVVVIAKDNHDLMLNIVRKFNHTKVKVVHGGTTRHRSIYNGLQAFSDSTDSSTPKPKVVIIHDAVRPFVEEDLLLKITLAAKEQGASGAIRPLVSTVIATTSESYLDHSLERAKYRASEMPQ 236          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_XYLFA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Xylella fastidiosa GN=ispD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI-FEETKEKINVDLKFSLPGKERQDSVYSG---LQEVDFNSELVCIHDSARPLVLSKDVQKVL-MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            ++ A G+G R G+ +PKQYLP++G+P+ +Y+    +    V  ++VV   +  D+ +    E     L     G  R  SV SG   L +V    + V +HD+ARP V   D++++L         A+L VP + T+K A ++  +  T  R+ LW   TPQ+
Sbjct:    8 VIPAAGRGVRFGSPVPKQYLPVVGRPLIVYTLEALAAHPAVCGLMVVV--AEGDLAWSSWTEVAGKPLLTCSGGVTRAASVLSGLLALPQVVHADDFVLVHDAARPNVALSDLERLLEAGCAHPVGAILAVPVRDTLKRAGADGSIDGTEPRERLWRAFTPQL 168          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_STRA3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Streptococcus agalactiae serotype III GN=ispD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 1
Query:  205 ILLAGGKGKRMGAN-MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD-LKFSLPGKER-QDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ AGG G+RM     PKQ+L + G+PI +++   F     +  +VVVC   + D      E+ N+  +K  + G E  Q S++ GL+  +    +  +V IHD  RPL+  + +   +      G+AV  V AK T+   N  S +   +DR   +  + PQ
Sbjct:    5 VIFAGGVGRRMNTKGKPKQFLEVHGKPIIVHTIDIFQNTEAIDAVVVVCVSDWLDYMNNLVERFNLTKVKAVVAGGETGQMSIFKGLEAAEQLATDDAVVLIHDGVRPLINEEVINANIKSVKETGSAVTSVRAKETVVLVNDSSKISEVVDRTRSFIAKAPQ 167          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHRVO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chromobacterium violaceum GN=ispD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 53/160 (33.12%), Postives = 83/160 (51.88%), Query Frame = 1
Query:  214 AGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDP--SYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVL--MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            A G G R GA  PKQYL L G+P+  ++  T + + +V E+ VV  P   + D F     K++V     + G  R  SV SGL  +   + + V +HD+AR  +    V++++  +    VG  +L +P   T+K A+ +  V  T+ R  LW  QTPQ+
Sbjct:    7 AAGSGSRFGAPSPKQYLQLNGKPLMWHTLATVAAVPDVDEVAVVISPQDEWFDDFAWDLPKLSV---HRVGGASRAQSVASGLAALACADDDWVLVHDAARCCLSVAAVERLIAALSGHAVG-GLLALPVPDTVKRADIDGHVAATVPRNGLWLAQTPQM 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_MICAN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=ispD PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV-----DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G GKRMG++  K  L L G+P+  +   T    +E + I+ +   +  + FEE +  I        ++    G+ RQ SVY+GLQ +   +E V IHD AR L   +   +           +  +P K TIK  +S+ ++  T DR  LW  QTPQ
Sbjct:    4 LIPAAGMGKRMGSDRNKLLLTLHGKPLLAW---TLLAAMESRAIIWIGIMAQPEDFEEIRAIITPINALKPVQIIQGGETRQKSVYNGLQALPEGAETVLIHDGARCLATPELFDRCAAALATCQGFIAAIPVKDTIKIVDSKGWIEDTPDRSRLWAAQTPQ 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_GEOSL (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacter sulfurreducens GN=ispD PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 1
Query:  214 AGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVV--------CDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            A G GKRMGA++ KQYL L G+PI  ++   F     V  I V+        C     + +  TK +  V       G ERQ SV +GL+ ++    + +++ IHD  RP V +  + +    A     A++ VPAK T+K    +  +  T  R+TLW  QTPQ
Sbjct:    9 AAGMGKRMGASINKQYLILAGRPILAHTLSVFEGASFVDGIFVITPEDEIPFCRDHVVERYGFTKVRGIV-----AGGAERQHSVLNGLRAMEGTVADDDVILIHDGVRPFVSTDVLARATAVAREDDGALVAVPAKDTVKTV-EDGIITGTPPRETLWLAQTPQ 167          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD2_VIBPA (Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 OS=Vibrio parahaemolyticus GN=ispD2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  205 ILLAGGKGKRM-GANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD-LKFSLPGKER-QDSVYSGL----QEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ AGG G RM  +  PKQ+L L  +P+ +Y+   F     +  IVVVC   + D   +   K ++  +KF +PG E  Q+S+++GL    +E D NS +V IHD  RPL+  + + + +      G+A+   P   T    ++E  V    DR      + PQ
Sbjct:    5 LIFAGGVGTRMQNSTKPKQFLELYNKPVIIYTLEKFEENKNIDAIVVVCVEPWIDYLRKLLFKFDIQKVKFVIPGGETGQESIFNGLCKIEEEFDHNS-VVLIHDGVRPLINDEIINRNIEAVKSHGSAITTCPPVETFVLVDNEDVVKDVHDRSLSRLAKAPQ 167          
The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ISPD_PROM54.572e-1327.392-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_PROM44.572e-1329.942-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLPB4.572e-1328.242-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPDL_DANRE4.572e-1329.702-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_XYLFA5.971e-1331.292-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_STRA35.971e-1329.452-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHRVO5.971e-1333.132-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_MICAN7.798e-1331.482-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_GEOSL7.798e-1333.332-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD2_VIBPA7.798e-1331.10Putative 2-C-methyl-D-erythritol 4-phosphate cytid... [more]

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Properties
Property NameValue
Genbank descriptionC34104E04EF PostHarvP1 Citrus clementina cDNA clone C34104E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bp
CTGCTTCAGCTGAACCTTGCTCTGTCTTCTTCAACTTCTTCTCTCTCACT
GTTCCCAGACAACCACCAAACTTTCTCCAGAACTGGTCATAAAAATCAGT
TCTTTGGCTTGACAAGGAAGGCCAGGCTTGCAACATCCAGGATTAGATGT
TCTGCTAAAGTTGATAATGGTTCTGTCGTTGTTAAAGATAAGAGTGTATC
AGTTATTCTTTTGGCTGGAGGGAAGGGCAAAAGAATGGGTGCGAACATGC
CAAAGCAGTATCTACCACTTTTGGGTCAACCCATTGCATTGTATAGTTTC
TACACTTTCTCACGCATGGTTGAAGTGAAGGAAATTGTGGTAGTTTGTGA
TCCATCTTACAGTGACATCTTTGAAGAAACCAAAGAGAAGATCAATGTAG
ACCTTAAATTCTCACTTCCGGGGAAGGAGAGGCAAGATTCTGTTTACAGC
GGACTTCAGGAAGTTGATTTTAACTCTGAGCTCGTGTGCATCCATGATTC
TGCTAGACCTTTGGTATTATCTAAAGATGTGCAAAAGGTCCTTATGGATG
CTTTGCGGGTCGGAGCAGCTGTACTTGGTGTTCCTGCCAAAGCTACAATT
AAAGAGGCAAATAGCGAATCTTTTGTGGTTAGAACCCTGGACCGCAAAAC
TCTTTGGGAAATGCAGACCCCTCAGGTGATCAAGCCTGGCTTGCTTAAAA
AGGGTTTGAGCTTGTCATAGGGAAGGTCTTGAAGTACTGATGATGTATCT
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