FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_AERHH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ispD PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12 Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G RMGA PKQYL L G+ I ++ + +++V P + F+ + + G ER SV + L E V +HD+ARP + D+ ++ A+ A+LG + T+K ++ ++ T+DR+ LW TPQ+ Sbjct: 11 IVPAAGIGSRMGAECPKQYLQLAGRTILEHTLTRLLSHPAIAQVIVALAP-HDRWFDTLAVAADPRILRVEGGAERAFSVLNALHVAA--GEWVLVHDAARPCLTHGDLDALIATAMACDGAILGSRVRDTMKRSDGAGNILATVDREQLWHALTPQM 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ESCF3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ispD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12 Identity = 49/160 (30.63%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + + I +S + V +++V P S F + + + G+ER DSV +G++ V ++E V +HD+ARP + D+ ++ L + R G +L P + T+K A ++ + T+DR LW TPQ Sbjct: 11 VVPAAGYGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVIIVISPGDSR-FAQLPLANHPQITVVDGGEERADSVLAGIKAVG-DAEWVLVHDAARPCLHQDDLARLLTLSETSRTG-GILAAPVRDTMKRAEPGKNAIAHTVDRSGLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_DECAR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Dechloromonas aromatica (strain RCB) GN=ispD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12 Identity = 55/173 (31.79%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS------YSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQE---VDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAA------VLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G R GA PKQYL LLG+P+ ++ + +++ + VV P Y + E K+ G R +SV +GL+ V + + V +HD+ARP + ++DAL A +L VP T+K A++E V T R LW+ QTPQ+ Sbjct: 7 IVPAAGSGSRFGAEKPKQYLDLLGRPLIFHTLAALTASPDIERVWVVLAPDDPWWPRYD--WSELGSKLET---VRCGGATRAESVSNGLRAAAMVAADDDWVLVHDAARPC-----LSAAMLDALFAELASDPVGGILAVPVADTLKRADAEQRVGATEPRDGLWQAQTPQM 169
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ACIC5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=ispD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12 Identity = 50/171 (29.24%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 205 ILLAGGKGKRMGA-----NMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV-----DLKFSLPGKERQDSVYSGLQEVDFN-SELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEAN---SESFVVRTLDRKTLWEMQTPQ 675 IL A G G RM A + PKQ+L L G P+ +++ F+ + V ++V P+ E + ++N ++ G RQ SV L V+ + S++V +HD+ RPL+ + + + + GAA++G+PA TIK+ + + + T+ R+ + + QTPQ Sbjct: 6 ILPAAGLGTRMAAGSHTPHQPKQFLELEGVPVLIHTLRAFAAVPAVSAMIVAVRPNE---IERVQAQVNEYGFQDKVRVVAGGDSRQQSVSRALATVECDASDIVLVHDAVRPLIEPAVIARTIEAVEKSGAAIVGLPAVDTIKQVERTAAGAIITATIPREYIVQAQTPQ 173
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNY3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=ispD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 46/159 (28.93%), Postives = 76/159 (47.80%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G GKRMG+ K L +LGQP+ ++ ++ I ++ P FE ++ ++ + G RQ SV++G+Q + ++ V IHD AR L + + +P K TIK N++ ++ T DR+ LW QTPQ Sbjct: 4 LIPAAGSGKRMGSGHNKLLLNVLGQPLLSWTVQAALASQSIEWIGIMGQPYDFPAFEALLTPLHSPKPVQLIVGGDTRQQSVFNGIQALPPGAKFVLIHDGARCLATPDLFDRCTEALQHCQGLIAAMPVKDTIKIVNADGWITDTPDRQGLWGAQTPQ 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHISS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shigella sonnei (strain Ss046) GN=ispD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + Q I +S + VK +V+ P S F + + + G ER DSV +GL+ +++ V +HD+ARP + D+ ++ L + R G +L P + T+K A ++ + T+DR LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSR-FAQLPLANHPQITVVDGGDERADSVLAGLKAAG-DAQWVLVHDAARPCLHQDDLARLLALSETSRTG-GILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHIDS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ispD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + Q I +S + VK +V+ P S F + + + G ER DSV +GL+ +++ V +HD+ARP + D+ ++ L + R G +L P + T+K A ++ + T+DR LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSR-FAQLPLANHPQITVVDGGDERADSVLAGLKAAG-DAQWVLVHDAARPCLHQDDLARLLALSETSRTG-GILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHIBS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=ispD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + Q I +S + VK +V+ P S F + + + G ER DSV +GL+ +++ V +HD+ARP + D+ ++ L + R G +L P + T+K A ++ + T+DR LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSR-FAQLPLANHPQITVVDGGDERADSVLAGLKAAG-DAQWVLVHDAARPCLHQDDLARLLALSETSRTG-GILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHIB3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ispD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + Q I +S + VK +V+ P S F + + + G ER DSV +GL+ +++ V +HD+ARP + D+ ++ L + R G +L P + T+K A ++ + T+DR LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSR-FAQLPLANHPQITVVDGGDERADSVLAGLKAAG-DAQWVLVHDAARPCLHQDDLARLLALSETSRTG-GILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSESM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas syringae pv. tomato GN=ispD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVV---VCDPSYSDIFEETKEKIN-VDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L G I +S F +K +V+ V DP ++ + +I VD G+ER SV + L + + + V +HD+ARP + D+ +L VG +L VPA+ T+K A+S+ VV T+DR +W+ TPQ+ Sbjct: 11 VIPAAGIGARMAADRPKQYLQLGGLTILEHSLLCFLDHPRLKGLVISLAVDDPYWAALPCAHDSRIQRVD-----GGRERSGSVLNALLHLHAQGASDDDWVLVHDAARPNLARSDLDNLLGQLADDPVGG-LLAVPARDTLKRADSDGRVVETVDRSLIWQAFTPQM 172 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |