FC931379

Overview
NameFC931379
Unique NameFC931379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOBJ (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=ispD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  +  +K N++   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +    + GAA  GV  K TIK  N + F + T +R+ L+ +QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGDIIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQ 165          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOB6 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=ispD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23
Identity = 61/159 (38.36%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  +  +K N++   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +    + GAA  GV  K T+K  + + F + T +R+ L+ +QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVALEDKIEVCSDIIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYVNQYGAAACGVIPKDTVKIKDEKGFAIDTPNREDLFIVQTPQ 165          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOBK (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=ispD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.086e-22
Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRM +++ KQ+L +  +PI  Y+   FS    + EIV+V      ++  +  +K N++   K    GKERQDSVY+GL+ V  + E+V IHD+ARP V S  ++  +    + GAA  GV  K TIK  + + F + T +R+ L+ +QTPQ
Sbjct:    7 IIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGDIIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTIKIKSEKGFAIDTPNREDLFIVQTPQ 165          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ALKOO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=ispD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I++A GKGKRMG +  KQY+ L  QPI  ++   F  M  + EI++V      +  +++  ++    K S     G ER+DSVY+GL+ V  +  +V IHD ARPL+    +++ ++ A   GA +  VP K TIK +N    V+ T  R  LW +QTPQ
Sbjct:   10 IIVAAGKGKRMGRDYNKQYIQLEAQPIVAHTIKVFEEMDCINEIILVVGAGEVEFLKKSIIEVYGFQKVSAIVEGGLERRDSVYNGLKAVSQDCSIVLIHDGARPLITKDIIEESIIVAKESGACIAAVPVKDTIKISNDNMEVIHTPKRDNLWSVQTPQ 169          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOPS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=ispD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++LAGGKGKRMGA + KQ++ + G+PI  Y+   F    ++ EI++V      D F+   E    D K S     GKERQDSVY+ L  +  + ++V IHD AR  V +K ++  +  +   GAA  GV  K TIK  N E F V T +R +L  +QTPQ
Sbjct:    7 VILAGGKGKRMGAEVSKQFIEINGKPIIYYTLKAFEECKDIDEIILVLPKDEIDYFKREIEP-RFDFKISKIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVMPKDTIKVKNLEGFSVDTPNRASLVAVQTPQ 164          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ALKMQ (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22
Identity = 59/161 (36.65%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            I++A GKGKRMG +  KQY+ L  +PI  ++   F +  E+ EI++V      +  +     K  +    K    G ER++SV +GL+E++   E+V +HD ARP +  + + K +  A   GA ++ VP K TIK  N +  VV T +R+ LW +QTPQV
Sbjct:   10 IVVAAGKGKRMGRSYNKQYIMLENKPILYHTLAVFEKHSEINEIILVVASGEEEYCQGQIIKKYGLKKVRKVVAGGSERRNSVKNGLEELEEACEVVLVHDGARPFITKEVITKSIEVAYEEGAVIVAVPVKDTIKRVNEKMEVVETPERQQLWAVQTPQV 170          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_GEOTN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I+LA G+GKRM A M KQ++ L G+P+ + +   F        IV+V +P+    FE+  E+  +   + F+  G+ERQ SVY+GLQ +  + E+V IHD ARP V  + + ++   A++ GAA+  V  K TIK+ +   FV +T+DR +LW +QTPQ
Sbjct:    6 IVLAAGQGKRMNAGMNKQFIELGGEPLIVRTLKVFDGDERCNGIVLVVNPTERGQFEQLFERYRIRKVVAFADGGQERQHSVYNGLQALR-SGEIVLIHDGARPFVRIRHLHELADAAVQYGAAIPAVRVKDTIKKVDG-LFVEQTIDRSSLWAVQTPQ 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOPE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium perfringens GN=ispD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++LAGGKGKRMGA + KQ++ + G+PI  Y+   F     + EI++V      D F+   E    D K S     GKERQDSVY+ L  +  + ++V IHD AR  V +K ++  +  +   GAA  GV  K TIK  N E F V T +R +L  +QTPQ
Sbjct:    7 VILAGGKGKRMGAEVSKQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDYFKREIEP-RFDFKISKIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVMPKDTIKVKNLEGFSVDTPNRASLVAVQTPQ 164          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOP1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=ispD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++LAGGKGKRMGA + KQ++ + G+PI  Y+   F     + EI++V      D F+   E    D K S     GKERQDSVY+ L  +  + ++V IHD AR  V +K ++  +  +   GAA  GV  K TIK  N E F V T +R +L  +QTPQ
Sbjct:    7 VILAGGKGKRMGAEVSKQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDYFKREIEP-RFDFKISKIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVMPKDTIKVKNLEGFSVDTPNRASLVAVQTPQ 164          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNAS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=ispD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22
Identity = 62/160 (38.75%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS---LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I+ AGG G+RM ++ PKQY  + G P+ +++     +   + EI++V   S      +  EK     K       G+ERQDSV +GL+ V    E+V IHD  RP V  K + +V+  A R GAA+  VPA  T+KE +S+  +  TLDRK +W  QTPQ
Sbjct:    8 IVPAGGSGRRMQSSNPKQYFLINGMPVLVHTLLRLQQFPLIDEILLVVPHSDMVFVRDNIEKPYQLTKIRGIVAGGRERQDSVRNGLKCVVEKDEIVVIHDGVRPFVTEKILSRVIDAAHRSGAAIAAVPAMDTVKEVHSDGHISVTLDRKRIWLAQTPQ 167          
The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ISPD_CLOBJ2.857e-2339.622-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOB66.364e-2338.362-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOBK1.086e-2238.992-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_ALKOO1.418e-2237.502-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOPS1.852e-2240.632-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_ALKMQ2.418e-2236.652-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_GEOTN3.159e-2239.622-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOPE5.388e-2240.632-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOP15.388e-2240.632-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_SYNAS7.037e-2238.752-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

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Properties
Property NameValue
Genbank descriptionC34104E04EF PostHarvP1 Citrus clementina cDNA clone C34104E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bp
CTGCTTCAGCTGAACCTTGCTCTGTCTTCTTCAACTTCTTCTCTCTCACT
GTTCCCAGACAACCACCAAACTTTCTCCAGAACTGGTCATAAAAATCAGT
TCTTTGGCTTGACAAGGAAGGCCAGGCTTGCAACATCCAGGATTAGATGT
TCTGCTAAAGTTGATAATGGTTCTGTCGTTGTTAAAGATAAGAGTGTATC
AGTTATTCTTTTGGCTGGAGGGAAGGGCAAAAGAATGGGTGCGAACATGC
CAAAGCAGTATCTACCACTTTTGGGTCAACCCATTGCATTGTATAGTTTC
TACACTTTCTCACGCATGGTTGAAGTGAAGGAAATTGTGGTAGTTTGTGA
TCCATCTTACAGTGACATCTTTGAAGAAACCAAAGAGAAGATCAATGTAG
ACCTTAAATTCTCACTTCCGGGGAAGGAGAGGCAAGATTCTGTTTACAGC
GGACTTCAGGAAGTTGATTTTAACTCTGAGCTCGTGTGCATCCATGATTC
TGCTAGACCTTTGGTATTATCTAAAGATGTGCAAAAGGTCCTTATGGATG
CTTTGCGGGTCGGAGCAGCTGTACTTGGTGTTCCTGCCAAAGCTACAATT
AAAGAGGCAAATAGCGAATCTTTTGTGGTTAGAACCCTGGACCGCAAAAC
TCTTTGGGAAATGCAGACCCCTCAGGTGATCAAGCCTGGCTTGCTTAAAA
AGGGTTTGAGCTTGTCATAGGGAAGGTCTTGAAGTACTGATGATGTATCT
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